RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 AS3MTQ9HBK9 375 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 PNPLA8Q9NP80 782 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 C1orf112Q9NSG2 853 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 PRR34Q9NV39 138 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 ZNF711Q9Y462 761 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 MST1RQ04912 1400 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 FMN1Q68DA7 1419 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 SAMD9LQ8IVG5 1584 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 ABCC2Q92887 1545 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 KIAA0586Q9BVV6 1533 aa1.96□□□□□ -2.1
CCDC39-203ENST00000473854 CFAP65Q6ZU64 1925 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 TCOF1Q13428 1488 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 PLB1Q6P1J6 1458 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 PTPRKQ15262 1439 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 FGD6Q6ZV73 1430 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 A0A0G2JPF8 293 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 PNMA6EA0A0J9YXQ4 647 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 HNRNPCL3B7ZW38 293 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 BLOC1S5-TXNDC5H3BN57 136 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 CHL1O00533 1208 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 HNRNPCL1O60812 293 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 SRSF10O75494 262 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 KDM4BO94953 1096 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 HNRNPCL4P0DMR1 293 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 ARSAP15289 507 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 TSHRP16473 764 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 EGR1P18146 543 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 SSTR2P30874 369 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 GPR12P47775 334 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 RAB27AP51159 221 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 FUT6P51993 359 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 FOXL2P58012 376 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 PIN1Q13526 163 aaPredicted RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 ZACNQ401N2 412 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 LCTLQ6UWM7 567 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 CEACAM20Q6UY09 585 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 BEND5Q7L4P6 421 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 STT3BQ8TCJ2 826 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 LRRC46Q96FV0 321 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 REXO5Q96IC2 774 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 TTC14Q96N46 770 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 RTFDC1Q9BY42 306 aaPredicted RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 EIF2AQ9BY44 585 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 HELLSQ9NRZ9 838 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 ZMYND8Q9ULU4 1186 aaPredicted RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 COPG1Q9Y678 874 aaKnown RBP1.95□□□□□ -2.1
CCDC39-203ENST00000473854 KIF13AQ9H1H9 1805 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 TRIOBPQ9H2D6 2365 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 KDM5BQ9UGL1 1544 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 CCNB3Q8WWL7 1395 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 ABCA9Q8IUA7 1624 aa1.95□□□□□ -2.1
CCDC39-203ENST00000473854 DENND4BO75064 1496 aaPredicted RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 ABCC10Q5T3U5 1492 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 CEP152O94986 1710 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 UNC13BO14795 1591 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 MYO5BQ9ULV0 1848 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 PPRC1Q5VV67 1664 aaKnown RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3DA0A087WVF3 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3IA0A087WXS9 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3EA0A087X179 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3KA0A087X1G2 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 LOC105369274A0A096LPK9 316 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 LOC102723532A0A0G2JNH3 316 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3BA6NDS4 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3FA6NER0 549 aaPredicted RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 A6NNZ2 444 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3LB9A6J9 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TIMM23O14925 209 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 DHHO43323 396 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 CLDN14O95500 239 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3HP0C7X1 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 PAX1P15863 534 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 NR1D1P20393 614 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 RPL15P61313 204 aaKnown RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 CYP4A11Q02928 519 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 MCL1Q07820 350 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 RIGQ13278 110 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 SYTL3Q4VX76 610 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 IRAK1BP1Q5VVH5 260 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TMEM268Q5VZI3 342 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3GQ6DHY5 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3CQ6IPX1 549 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 SLC9B2Q86UD5 537 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 DGKHQ86XP1 1220 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D3Q8IZP1 549 aaPredicted RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 OR4N4Q8N0Y3 316 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TBC1D22AQ8WUA7 517 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 TRIB2Q92519 343 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 RBM4BQ9BQ04 359 aaKnown RBP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 HERPUD2Q9BSE4 406 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 FSD1Q9BTV5 496 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 LHPPQ9H008 270 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.94□□□□□ -2.1
CCDC39-203ENST00000473854 ERVMER34-1Q9H9K5 563 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 Q9N2J8 555 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 SLC12A4Q9UP95 1085 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 OSGIN2Q9Y236 505 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 SNX9Q9Y5X1 595 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 ZHX2Q9Y6X8 837 aa1.94□□□□□ -2.1
CCDC39-203ENST00000473854 DHX57Q6P158 1386 aaKnown RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms