RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 IGLON5A6NGN9 336 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 FFAR2O15552 330 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 TSPAN6O43657 245 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 CREB3O43889 395 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 JUPP14923 745 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 AIF1P55008 147 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 TARDBPQ13148 414 aaKnown RBP eCLIP19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 FZD2Q14332 565 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 MYLK3Q32MK0 819 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 ANO6Q4KMQ2 910 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 TPRG1LQ5T0D9 272 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 ACAD10Q6JQN1 1059 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 ZSCAN30Q86W11 494 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 NETO2Q8NC67 525 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 FAM174AQ8TBP5 190 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 RFFLQ8WZ73 363 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 HMCESQ96FZ2 354 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 KLHL32Q96NJ5 620 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 LENG8Q96PV6 779 aaPredicted RBP19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 OSBPL1AQ9BXW6 950 aa19.07■□□□□ 0.64
CCDC88B-206ENST00000473405 SPTY2D1-AS1A0A0U1RR47 76 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 ANKRD62A6NC57 917 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 WASH4PA8MWX3 477 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 RASA4BC9J798 803 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 AREL1O15033 823 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 RASA4O43374 803 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 BUB1O43683 1085 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 POP4O95707 220 aaKnown RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 HOXB3P14651 431 aaPredicted RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 YBEYP58557 167 aaPredicted RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 INSM1Q01101 510 aaPredicted RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 SERINC3Q13530 473 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 COL28A1Q2UY09 1125 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 ZNF542PQ5EBM4 170 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 LRRC73Q5JTD7 316 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 DCP2Q8IU60 420 aaKnown RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 UMODL1-AS1Q8N2C9 162 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 CASKIN2Q8WXE0 1202 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 NXPE2Q96DL1 559 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 GDAP1L1Q96MZ0 367 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 EPAS1Q99814 870 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 BPIFA3Q9BQP9 254 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 TTYH3Q9C0H2 523 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 SCUBE2Q9NQ36 999 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 DNAJC28Q9NX36 388 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 MYO6Q9UM54 1294 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 LRP4O75096 1905 aa19.06■□□□□ 0.64
CCDC88B-206ENST00000473405 LY6G6EA0A0G2JKS1 128 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 ATMINO43313 823 aaPredicted RBP19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 NME1P15531 152 aaKnown RBP19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 RABIFP47224 123 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 MAMLD1Q13495 774 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 PARP15Q460N3 678 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 INO80DQ53TQ3 878 aaPredicted RBP19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 DCUN1D2Q6PH85 259 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 GDPD4Q6W3E5 623 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 TMC6Q7Z403 805 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 PARGQ86W56 976 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 ZNF354CQ86Y25 554 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 DENND6BQ8NEG7 585 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 ZNF548Q8NEK5 533 aaPredicted RBP19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 ASB12Q8WXK4 309 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 LRRC19Q9H756 370 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 NLGN3Q9NZ94 848 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 LHX3Q9UBR4 397 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 KLF15Q9UIH9 416 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 U3KQA8 63 aa19.05■□□□□ 0.64
CCDC88B-206ENST00000473405 ASXL3Q9C0F0 2248 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 LRRC53A6NM62 1247 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 NEMP1O14524 444 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 FPGTO14772 594 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 FGF10O15520 208 aaPredicted RBP19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 IGSF6O95976 241 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 CSF2P04141 144 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 CCDC172P0C7W6 258 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 CKMT1AP12532 417 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 PFN3P60673 137 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 RHOAP61586 193 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 SGCGQ13326 291 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 PLEKHA7Q6IQ23 1121 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 DNAAF5Q86Y56 855 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 ARFGAP1Q8N6T3 406 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 DCBLD1Q8N8Z6 715 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 HNRNPLLQ8WVV9 542 aaKnown RBP19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 ARHGEF26Q96DR7 871 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 VCPIP1Q96JH7 1222 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 EXOC2Q96KP1 924 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 PEBP4Q96S96 227 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 CATSPERBQ9H7T0 1116 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 PDFQ9HBH1 243 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 GPATCH2LQ9NWQ4 482 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 PTPRQQ9UMZ3 2332 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 MFHAS1Q9Y4C4 1052 aa19.04■□□□□ 0.64
CCDC88B-206ENST00000473405 A0A087WV48 116 aa19.03■□□□□ 0.64
CCDC88B-206ENST00000473405 TMCO5BA8MYB1 307 aa19.03■□□□□ 0.64
CCDC88B-206ENST00000473405 SCAMP1O15126 338 aa19.03■□□□□ 0.64
CCDC88B-206ENST00000473405 INSIG1O15503 277 aa19.03■□□□□ 0.64
CCDC88B-206ENST00000473405 NEBLO76041 1014 aa19.03■□□□□ 0.64
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