RNA–Protein interactions for RNA: ENST00000473380.1

MSL3-211, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-211ENST00000473380 CNOT7Q9UIV1 285 aaKnown RBP4.82□□□□□ -1.64
MSL3-211ENST00000473380 TUBE1Q9UJT0 475 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 ITGA11Q9UKX5 1188 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 BAG5Q9UL15 447 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 AGAP1Q9UPQ3 857 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 DNAJC16Q9Y2G8 782 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 SF3B6Q9Y3B4 125 aaKnown RBP4.82□□□□□ -1.64
MSL3-211ENST00000473380 PCDHGA5Q9Y5G8 931 aa4.82□□□□□ -1.64
MSL3-211ENST00000473380 RGPD8O14715 1765 aaPredicted RBP4.82□□□□□ -1.64
MSL3-211ENST00000473380 NAIPQ13075 1403 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 IFT172Q9UG01 1749 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 FAM205AQ6ZU69 1335 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 KDM3AQ9Y4C1 1321 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 A0A1W2PQ27 194 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 A0A1W2PQ64 194 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 A0A1W2PQC6 194 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 A0A1W2PQD8 194 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 DENND3A2RUS2 1198 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 NPIPB15A6NHN6 443 aaPredicted RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 LIPT2A6NK58 231 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 RSPH10B2B2RC85 870 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TMEM232C9JQI7 657 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ZNF561-AS1K7EIQ3 104 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 KLHL18O94889 574 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PDE8BO95263 885 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 GLP2RO95838 553 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 LPLP06858 475 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 THBDP07204 575 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TUBBP07437 444 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 RSPH10BP0C881 870 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ARP10275 920 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CCDC130P13994 396 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PFKLP17858 780 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PTPN3P26045 913 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 GGT5P36269 586 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CCT6AP40227 531 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 WNT5AP41221 380 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 LIG4P49917 911 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 BCAT1P54687 386 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TUBA1BP68363 451 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TUBB4BP68371 445 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PRAMEP78395 509 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ATP8B2P98198 1209 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PTP4A2Q12974 167 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 MALLQ13021 153 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TRAF1Q13077 416 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 KCNAB2Q13303 367 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 DDX39BQ13838 428 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 HNRNPDQ14103 355 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 DHX34Q14147 1143 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 CLCA4Q14CN2 919 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ZRSR1Q15695 479 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 CHRNA2Q15822 529 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 DGKDQ16760 1214 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ERCC6LQ2NKX8 1250 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CRY2Q49AN0 593 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 KCTD21Q4G0X4 260 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 COLEC12Q5KU26 742 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 SPATA46Q5T0L3 261 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 C1orf185Q5T7R7 199 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 NT5DC1Q5TFE4 455 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PDPK2PQ6A1A2 396 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 USP17L6PQ6QN14 398 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TMEM270Q6UE05 265 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 C6orf89Q6UWU4 347 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 RBM43Q6ZSC3 357 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 TUBA1AQ71U36 451 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ERN2Q76MJ5 926 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 RRAGAQ7L523 313 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 HEATR3Q7Z4Q2 680 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 DSG4Q86SJ6 1040 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CEP57Q86XR8 500 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 FIBCD1Q8N539 461 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 VGLL2Q8N8G2 317 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 POC5Q8NA72 575 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ATAD1Q8NBU5 361 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TSPEARQ8WU66 669 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CACTINQ8WUQ7 758 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 KBTBD7Q8WVZ9 684 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 MRPS27Q92552 414 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 COPS5Q92905 334 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 ZKSCAN4Q969J2 545 aaPredicted RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 TTC25Q96NG3 672 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PTCHD1Q96NR3 888 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 MTMR9Q96QG7 549 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 WRNIP1Q96S55 665 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 PRRX2Q99811 253 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 THUMPD2Q9BTF0 503 aaKnown RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 SLC12A9Q9BXP2 914 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 PCED1AQ9H1Q7 454 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 TP63Q9H3D4 680 aaPredicted RBP4.81□□□□□ -1.64
MSL3-211ENST00000473380 ST6GALNAC4Q9H4F1 302 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 LTB4R2Q9NPC1 389 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 GPR108Q9NPR9 543 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 CENPMQ9NSP4 180 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 SOHLH2Q9NX45 425 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 LPAR3Q9UBY5 353 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 DPP7Q9UHL4 492 aa4.81□□□□□ -1.64
MSL3-211ENST00000473380 SLC8A2Q9UPR5 921 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms