RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RWDD4Q6NW29 188 aaKnown RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 GK5Q6ZS86 529 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 KDM1BQ8NB78 822 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 FAM81AQ8TBF8 368 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 DPF3Q92784 378 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 DDX18Q9NVP1 670 aaKnown RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 PLK2Q9NYY3 685 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 ACOT9Q9Y305 439 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 MBLAC1A4D2B0 266 aaPredicted RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 RRN3P2A6NIE6 340 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 ARNTP27540 789 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 RFTN1Q14699 578 aaPredicted RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 IL23RQ5VWK5 629 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 PTAR1Q7Z6K3 402 aaPredicted RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 PCDH20Q8N6Y1 951 aaKnown RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 ATP6V1E2Q96A05 226 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 SENP6Q9GZR1 1112 aaPredicted RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 WDCPQ9H6R7 721 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 NDFIP2Q9NV92 336 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 MIOSQ9NXC5 875 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 TLL2Q9Y6L7 1015 aa21.35■■□□□ 1.01
COL18A1-207ENST00000473212 DICER1Q9UPY3 1922 aaKnown RBP21.35■■□□□ 1.01
COL18A1-207ENST00000473212 SMIM35A0A1B0GVV1 85 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 KCNU1A8MYU2 1149 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 C9IYK1 514 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 F2P00734 622 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 CHRNA4P43681 627 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 CLCNKBP51801 687 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 INHBCP55103 352 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 GJA9P57773 515 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 SH2D4BQ5SQS7 431 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 TAC4Q86UU9 113 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 NTAN1Q96AB6 310 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 DNAI2Q9GZS0 605 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 TNFRSF12AQ9NP84 129 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 RAD54BQ9Y620 910 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 A0A1B0GTW7 788 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 SCAPQ12770 1279 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 NRF1Q16656 503 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 SLC9A7Q96T83 725 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 KIFC1Q9BW19 673 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 SEMA6AQ9H2E6 1030 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 NSMCE4AQ9NXX6 385 aa21.34■■□□□ 1.01
COL18A1-207ENST00000473212 MTF2Q9Y483 593 aaPredicted RBP21.34■■□□□ 1.01
COL18A1-207ENST00000473212 TRIM38O00635 465 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 MTSS1O43312 755 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 STRNO43815 780 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 CAPNS1P04632 268 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 HNRNPLP14866 589 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL18A1-207ENST00000473212 HDCP19113 662 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 RANBP1P43487 201 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 HSPA13P48723 471 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 PGFP49763 221 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 NAPEPLDQ6IQ20 393 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 AMIGO2Q86SJ2 522 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 SLC10A4Q96EP9 437 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 GPR78Q96P69 363 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 PPP1R10Q96QC0 940 aaKnown RBP21.33■■□□□ 1.01
COL18A1-207ENST00000473212 GAD1Q99259 594 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 PCDHAC1Q9H158 963 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 TSPYL2Q9H2G4 693 aaPredicted RBP21.33■■□□□ 1.01
COL18A1-207ENST00000473212 NUDT5Q9UKK9 219 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 PHF24Q9UPV7 400 aa21.33■■□□□ 1.01
COL18A1-207ENST00000473212 HHLA1C9JL84 531 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 PDLIM1O00151 329 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 SDHDO14521 159 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 APOFQ13790 326 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 MFSD10Q14728 455 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 OLFML2BQ68BL8 750 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 EME1Q96AY2 570 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 MRPL1Q9BYD6 325 aaKnown RBP21.33■■□□□ 1
COL18A1-207ENST00000473212 ABHD16BQ9H3Z7 469 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 GTSE1Q9NYZ3 720 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 DMTF1Q9Y222 760 aa21.33■■□□□ 1
COL18A1-207ENST00000473212 CASTOR2A6NHX0 329 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 ZNF26P17031 533 aaPredicted RBP21.32■■□□□ 1
COL18A1-207ENST00000473212 RAB10P61026 200 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 PSME3P61289 254 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 PRPSAP1Q14558 356 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 MGAT5BQ3V5L5 792 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 ZNF789Q5FWF6 425 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 BRD8Q9H0E9 1235 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 HSFX1Q9UBD0 423 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 TMCO1Q9UM00 188 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 PCDHGA7Q9Y5G6 932 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 FAM95CA0A1B0GW59 222 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 XPOTO43592 962 aaKnown RBP21.32■■□□□ 1
COL18A1-207ENST00000473212 PENKP01210 267 aaPredicted RBP21.32■■□□□ 1
COL18A1-207ENST00000473212 HCAR3P49019 387 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 ADAM17P78536 824 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 TXNDC5Q8NBS9 432 aaKnown RBP21.32■■□□□ 1
COL18A1-207ENST00000473212 RNF34Q969K3 372 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 FICDQ9BVA6 458 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 SLC2A11Q9BYW1 496 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 CYP4F12Q9HCS2 524 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 EPS15L1Q9UBC2 864 aa21.32■■□□□ 1
COL18A1-207ENST00000473212 PMPCBO75439 489 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 ZNF189O75820 626 aaPredicted RBP21.31■■□□□ 1
COL18A1-207ENST00000473212 CSPG5O95196 566 aa21.31■■□□□ 1
COL18A1-207ENST00000473212 COL6A2P12110 1019 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms