RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 PCDH9Q9HC56 1237 aa10.67□□□□□ -0.7
UBE2F-220ENST00000472479 LHX3Q9UBR4 397 aa10.67□□□□□ -0.7
UBE2F-220ENST00000472479 IL36AQ9UHA7 158 aa10.67□□□□□ -0.7
UBE2F-220ENST00000472479 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
UBE2F-220ENST00000472479 EYSQ5T1H1 3165 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 TMEM221A6NGB7 291 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 C1QTNF3-AMACRE9PGA6 284 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 M0R296 226 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 KPNA3O00505 521 aaPredicted RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 NDC80O14777 642 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 METTL18O95568 372 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PRNPP04156 253 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 GKP32189 559 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PTGIRP43119 386 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 AP1S1P61966 158 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 SARNPP82979 210 aaKnown RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 SFSWAPQ12872 951 aaKnown RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 POM121L1PQ3SYA9 428 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 GLE1Q53GS7 698 aaKnown RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 FAM46CQ5VWP2 391 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 GDPD4Q6W3E5 623 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PPP1R21Q6ZMI0 780 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 Q6ZS52 159 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PCGF5Q86SE9 256 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 CACUL1Q86Y37 369 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 MMAAQ8IVH4 418 aaKnown RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PGBD5Q8N414 524 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 NOA1Q8NC60 698 aaKnown RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 CHST14Q8NCH0 376 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 IPMKQ8NFU5 416 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PJA1Q8NG27 643 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 SPATA22Q8NHS9 363 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 UBXN4Q92575 508 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PTPRN2Q92932 1015 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 FCRL5Q96RD9 977 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 MGME1Q9BQP7 344 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 GBA3Q9H227 469 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 ETNK1Q9HBU6 452 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 NOD2Q9HC29 1040 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 FAM153AQ9UHL3 310 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 SNX24Q9Y343 169 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 PCDHGC4Q9Y5F7 938 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 KIF26AQ9ULI4 1882 aaPredicted RBP10.66□□□□□ -0.7
UBE2F-220ENST00000472479 NUP205Q92621 2012 aa10.66□□□□□ -0.7
UBE2F-220ENST00000472479 RIOK3O14730 519 aaKnown RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 MUSKO15146 869 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 MT-CYBP00156 380 aaPredicted RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 DNTTP04053 509 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 UGT2B4P06133 528 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 APRTP07741 180 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 RGRP47804 291 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PSMD8P48556 350 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 CSNK1DP48730 415 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 GUCY2DQ02846 1103 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 NIPAL4Q0D2K0 466 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 CCDC15Q0P6D6 951 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 MPP3Q13368 585 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PTK6Q13882 451 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 ELAVL3Q14576 367 aaKnown RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 RALGPS1Q5JS13 557 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 C9orf64Q5T6V5 341 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 ARMC12Q5T9G4 340 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 NCEH1Q6PIU2 408 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 KIAA1324Q6UXG2 1013 aaKnown RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PLPP6Q8IY26 295 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 SLC25A41Q8N5S1 370 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 DNAAF3Q8N9W5 541 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 GLIS1Q8NBF1 620 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 BBOF1Q8ND07 529 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 OR2A12Q8NGT7 310 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 FRS2Q8WU20 508 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 IFT81Q8WYA0 676 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PRCCQ92733 491 aaPredicted RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PBXIP1Q96AQ6 731 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 RTP4Q96DX8 246 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 MYO19Q96H55 970 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PPP1R16AQ96I34 528 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 KLHL32Q96NJ5 620 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 ERP44Q9BS26 406 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 OSBPL6Q9BZF3 934 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 TMEM245Q9H330 911 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 SUV39H2Q9H5I1 410 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 EPB41L5Q9HCM4 733 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PRSS16Q9NQE7 514 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 SPATA6Q9NWH7 488 aaPredicted RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 ANAPC5Q9UJX4 755 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
UBE2F-220ENST00000472479 MMP17Q9ULZ9 603 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 NCKAP1Q9Y2A7 1128 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 RAI2Q9Y5P3 530 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 PRUNE2Q8WUY3 3088 aa10.65□□□□□ -0.7
UBE2F-220ENST00000472479 TCRBV21S2A2A0A5A6 115 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 LEFTY1O75610 366 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 GJB3O75712 270 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 PIGNO95427 931 aa10.64□□□□□ -0.71
UBE2F-220ENST00000472479 PDGFBP01127 241 aaPredicted RBP10.64□□□□□ -0.71
UBE2F-220ENST00000472479 NFKBIAP25963 317 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms