RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 SCTRP47872 440 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 STK19P49842 368 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 ATXN3P54252 364 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 CDH6P55285 790 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 CCDC173Q0VFZ6 552 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 DPYSL2Q16555 572 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 ATP13A4Q4VNC1 1196 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 BOLA3Q53S33 107 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 WDR45BQ5MNZ6 344 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 SYCP2LQ5T4T6 812 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 C11orf63Q6NUN7 778 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 LAYNQ6UX15 382 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 DAAM2Q86T65 1068 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 NLRP14Q86W24 1093 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 PSTKQ8IV42 348 aaKnown RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 CADM4Q8NFZ8 388 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 TEKT4Q8WW24 435 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 RPL10LQ96L21 214 aaKnown RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 ORAI3Q9BRQ5 295 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 SCNM1Q9BWG6 230 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 PCDH18Q9HCL0 1135 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 NDFIP2Q9NV92 336 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 DNAAF2Q9NVR5 837 aaKnown RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 TMEM248Q9NWD8 314 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 KIAA1522Q9P206 1035 aaPredicted RBP9.33□□□□□ -0.92
SMC4-213ENST00000472282 SLCO3A1Q9UIG8 710 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 PLA2G4CQ9UP65 541 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 ERVW-1Q9UQF0 538 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 TBC1D30Q9Y2I9 924 aa9.33□□□□□ -0.92
SMC4-213ENST00000472282 TPRP12270 2363 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 UPK3BL1B0FP48 263 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 UPK3BL2E5RIL1 263 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 H3BRJ5 948 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 BCAT2O15382 392 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 FGF10O15520 208 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 KRT86O43790 486 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 ATP5BP06576 529 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 SYPP08247 313 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 KRT7P08729 469 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 CD48P09326 243 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 VAV1P15498 845 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 HTR7P34969 479 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 ARL4AP40617 200 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 CSNK1EP49674 416 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 METAP1P53582 386 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 SIM1P81133 766 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 SLC12A1Q13621 1099 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 KRT81Q14533 505 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 HNRNPA1L2Q32P51 320 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 ZFYVE27Q5T4F4 411 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 C9orf64Q5T6V5 341 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 RNF219Q5W0B1 726 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 RFX8Q6ZV50 586 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 RABEPKQ7Z6M1 372 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 SETD3Q86TU7 594 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 HDDC3Q8N4P3 179 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 RTL3Q8N8U3 475 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 OR7D4Q8NG98 312 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 SNX19Q92543 992 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 PTPRN2Q92932 1015 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 TSGA10Q9BZW7 698 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 MUC3BQ9H195 1237 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 RSPH9Q9H1X1 276 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 CATSPERBQ9H7T0 1116 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 EBF2Q9HAK2 575 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 CWC15Q9P013 229 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 SUSD2Q9UGT4 822 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 DNAI1Q9UI46 699 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 KLK13Q9UKR3 277 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 GUCA1BQ9UMX6 200 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 FNDC3AQ9Y2H6 1198 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 PPP2R2CQ9Y2T4 447 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 ALG6Q9Y672 507 aa9.32□□□□□ -0.92
SMC4-213ENST00000472282 TDRD6O60522 2096 aaKnown RBP9.32□□□□□ -0.92
SMC4-213ENST00000472282 MYLKQ15746 1914 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 A0A0D9SEW6 157 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 A0A1B0GVT2 93 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 A0A1W2PP55 124 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ILVBLA1L0T0 632 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 LRRD1A4D1F6 860 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 GRID2IPA4D2P6 1211 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 WASH4PA8MWX3 477 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 KCNK3O14649 394 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 MSTNO14793 375 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 MID1O15344 667 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 DAPK3O43293 454 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 PSTPIP1O43586 416 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 FSBPO95073 299 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 SEMA4FO95754 770 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 DNTTP04053 509 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 KRT1P04264 644 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 ASLP04424 464 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 IGHV4-34P06331 123 aa9.31□□□□□ -0.92
SMC4-213ENST00000472282 GNSP15586 552 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms