RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PRSS16Q9NQE7 514 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 VPS45Q9NRW7 570 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 HCN2Q9UL51 889 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 UTP11Q9Y3A2 253 aaKnown RBP17.07■□□□□ 0.32
CCM2-205ENST00000472223 ACADMP11310 421 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 XPAP23025 273 aaPredicted RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 CD86P42081 329 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 CCR3P51677 355 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 POLR2LP62875 67 aaKnown RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 DSC2Q02487 901 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 GPS1Q13098 491 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 TRIP13Q15645 432 aaPredicted RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 CRY1Q16526 586 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 GLE1Q53GS7 698 aaKnown RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 ZNF776Q68DI1 518 aaPredicted RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 NCEH1Q6PIU2 408 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 GDPD4Q6W3E5 623 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 PCGF5Q86SE9 256 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 TMIEQ8NEW7 156 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 OR6K2Q8NGY2 324 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 IMP4Q96G21 291 aaKnown RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 ZNF641Q96N77 438 aaPredicted RBP17.06■□□□□ 0.32
CCM2-205ENST00000472223 FSD1LQ9BXM9 530 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 NOD2Q9HC29 1040 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 RAB6BQ9NRW1 208 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 BCCIPQ9P287 314 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCM2-205ENST00000472223 FAM153AQ9UHL3 310 aa17.06■□□□□ 0.32
CCM2-205ENST00000472223 KPNA3O00505 521 aaPredicted RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 ADAM23O75077 832 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 ZNF821O75541 412 aaPredicted RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 ADH1BP00325 375 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 DNTTP04053 509 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 ETS1P14921 441 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 RPL22P35268 128 aaKnown RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 CXCL12P48061 93 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 VPS41P49754 854 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 BASP1P80723 227 aaKnown RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 SARNPP82979 210 aaKnown RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 MPP3Q13368 585 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 FZD5Q13467 585 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 PTK6Q13882 451 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 ALG1LQ6GMV1 187 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 JAMLQ86YT9 394 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 MMAAQ8IVH4 418 aaKnown RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 MMGT1Q8N4V1 131 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 BBOF1Q8ND07 529 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 TSTD1Q8NFU3 115 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 GRIN3AQ8TCU5 1115 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 PDCD6IPQ8WUM4 868 aaKnown RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 PRCCQ92733 491 aaPredicted RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 RBM15Q96T37 977 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCM2-205ENST00000472223 ADGRE3Q9BY15 652 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 MTG2Q9H4K7 406 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 SPATA6Q9NWH7 488 aaPredicted RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 SCML1Q9UN30 329 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 NCKAP1Q9Y2A7 1128 aa17.05■□□□□ 0.32
CCM2-205ENST00000472223 ARIH1Q9Y4X5 557 aaPredicted RBP17.05■□□□□ 0.32
CCM2-205ENST00000472223 TCRBV21S2A2A0A5A6 115 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 ANTXRLA6NF34 631 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 ERI2A8K979 691 aaKnown RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 MUSKO15146 869 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 TTI1O43156 1089 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 SOCS5O75159 536 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 PMPCBO75439 489 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 LEFTY1O75610 366 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 PDGFBP01127 241 aaPredicted RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 ZSCAN5DPP0CG00 497 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 CR2P20023 1033 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 PSMB4P28070 264 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 RGRP47804 291 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 EPHB1P54762 984 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 ZBTB16Q05516 673 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 SLC14A2Q15849 920 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 TTC31Q49AM3 519 aaPredicted RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 ARMC12Q5T9G4 340 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 BMP8AQ7Z5Y6 402 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 TMPRSS6Q8IU80 811 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 TAB3Q8N5C8 712 aaPredicted RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 CHST14Q8NCH0 376 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 PIP4K2CQ8TBX8 421 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 GANCQ8TET4 914 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 SIPA1Q96FS4 1042 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 RSPH9Q9H1X1 276 aaPredicted RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 SUV39H2Q9H5I1 410 aa17.04■□□□□ 0.32
CCM2-205ENST00000472223 MUC22E2RYF6 1773 aaPredicted RBP17.04■□□□□ 0.32
CCM2-205ENST00000472223 A0A1W2PQF6 199 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 TTC24A2A3L6 582 aaPredicted RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 EFCAB8A8MWE9 144 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 F5H423 210 aaPredicted RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 SLU7O95391 586 aaKnown RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 UGT2B4P06133 528 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 C5AR1P21730 350 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 CD68P34810 354 aaPredicted RBP17.03■□□□□ 0.32
CCM2-205ENST00000472223 PTGIRP43119 386 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 PSMD8P48556 350 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 NRLP54845 237 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 SATB1Q01826 763 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 NIPAL4Q0D2K0 466 aa17.03■□□□□ 0.32
CCM2-205ENST00000472223 MTAPQ13126 283 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms