RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 LSMEM2Q8N112 164 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 LZTR1Q8N653 840 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 MARK4Q96L34 752 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 C8orf48Q96LL4 319 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 SMIM14Q96QK8 99 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 FAM167BQ9BTA0 163 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 STARD7Q9NQZ5 370 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 ZNF212Q9UDV6 495 aa15.2■□□□□ 0.02
UBXN11-213ENST00000472155 MTMR11A4FU01 709 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 ENPP3O14638 875 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 PDE5AO76074 875 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 UPP2O95045 317 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 ALOX15P16050 662 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 KCNA5P22460 613 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 YWHAQP27348 245 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 CDK18Q07002 472 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 TRIM68Q6AZZ1 485 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 MSANTD2Q6P1R3 559 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 EPGNQ6UW88 154 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 PTAR1Q7Z6K3 402 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 UMODL1-AS1Q8N2C9 162 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 OR13J1Q8NGT2 312 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 NSMCE3Q96MG7 304 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 CASD1Q96PB1 797 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 TRIM62Q9BVG3 475 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 ZYG11BQ9C0D3 744 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 MARCH2Q9P0N8 246 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 FBXO5Q9UKT4 447 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 A0A088AWK7 358 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 A0A0D9SEW6 157 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 PIGNO95427 931 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 PSMG1O95456 288 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 RPLP2P05387 115 aaKnown RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 ELF1P32519 619 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 DBN1Q16643 649 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 PPM1LQ5SGD2 360 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 RIPOR1Q6ZS17 1223 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 FRMD7Q6ZUT3 714 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 CNTN4Q8IWV2 1026 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 SCUBE1Q8IWY4 988 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 IMP4Q96G21 291 aaKnown RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 C1orf74Q96LT6 269 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 RPRD1AQ96P16 312 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 NUF2Q9BZD4 464 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 TNFRSF12AQ9NP84 129 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 ENTPD7Q9NQZ7 604 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 MARCH4Q9P2E8 410 aaPredicted RBP15.19■□□□□ 0.02
UBXN11-213ENST00000472155 SCN5AQ14524 2016 aa15.19■□□□□ 0.02
UBXN11-213ENST00000472155 TMEM189-UBE2V1I3L0A0 370 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 SCAMP3O14828 347 aaKnown RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 ABL2P42684 1182 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 CDK7P50613 346 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 RAB10P61026 200 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 MRPL58Q14197 206 aaKnown RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 TAF11Q15544 211 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 NFE2Q16621 373 aaPredicted RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 LRRC8EQ6NSJ5 796 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 LRRC8DQ7L1W4 858 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 HEXDCQ8WVB3 486 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 FAM136AQ96C01 138 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 SLC25A51Q9H1U9 297 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 DCLRE1BQ9H816 532 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 TM7SF2O76062 418 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 PRSS56P0CW18 603 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 PLK1P53350 603 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 MARC1Q5VT66 337 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 TIGD7Q6NT04 549 aaPredicted RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 NEPROQ6NW34 567 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 POTEHQ6S545 545 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 ZYG11AQ6WRX3 759 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 TXNDC5Q8NBS9 432 aaKnown RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 C2CD4AQ8NCU7 369 aaPredicted RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 GIMAP7Q8NHV1 300 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 STYXQ8WUJ0 223 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 FUBP3Q96I24 572 aaKnown RBP eCLIP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 FBXO44Q9H4M3 255 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 SP110Q9HB58 689 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 CYP4F12Q9HCS2 524 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 TMEM248Q9NWD8 314 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 UXTQ9UBK9 157 aaPredicted RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 ACOT9Q9Y305 439 aa15.18■□□□□ 0.02
UBXN11-213ENST00000472155 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
UBXN11-213ENST00000472155 WASH4PA8MWX3 477 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 GRID2O43424 1007 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 INHAP05111 366 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 RHOQP17081 205 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 ATF6P18850 670 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 SERPINB5P36952 375 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 RAP1GDS1P52306 607 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 EPHB1P54762 984 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 SLC12A1Q13621 1099 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 CSHL1Q14406 222 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 SNX30Q5VWJ9 437 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 CCNYL1Q8N7R7 359 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 ARRDC2Q8TBH0 407 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 RAET1EQ8TD07 263 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 ANKRD49Q8WVL7 239 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 SCLYQ96I15 445 aa15.17■□□□□ 0.02
UBXN11-213ENST00000472155 IL37Q9NZH6 218 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms