RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 FAM46DQ8NEK8 389 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MR1Q95460 341 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 CRELD1Q96HD1 420 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 TMEM120AQ9BXJ8 343 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MID1IP1Q9NPA3 183 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 FTSJ1Q9UET6 329 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 PSMD13Q9UNM6 376 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SLC38A8A6NNN8 435 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 CAPN14A8MX76 684 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MAN2B1O00754 1011 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MDM4O15151 490 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 GRM5P41594 1212 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 CPA2P48052 419 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 ATP13A5Q4VNC0 1218 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 C9orf57Q5W0N0 161 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 TMEM126BQ8IUX1 230 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 ABRAQ8N0Z2 381 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 TSPAN14Q8NG11 270 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 UBE2Q2Q8WVN8 375 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SELENOMQ8WWX9 145 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 ERP27Q96DN0 273 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SEMA3CQ99985 751 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 TMEM121Q9BTD3 319 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 EVLQ9UI08 416 aaPredicted RBP8.65□□□□□ -1.02
CD47-204ENST00000471694 STON1Q9Y6Q2 735 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MGRN1O60291 552 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 COILP38432 576 aaPredicted RBP8.65□□□□□ -1.02
CD47-204ENST00000471694 ATP12AP54707 1039 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 C17orf64Q86WR6 236 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 MRIQ9BWK5 157 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 TAPBPLQ9BX59 468 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SPATS2LQ9NUQ6 558 aaKnown RBP8.65□□□□□ -1.02
CD47-204ENST00000471694 CLUHO75153 1309 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 A8MUI8 341 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 H3BN98 237 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 KCNK1O00180 336 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.02
CD47-204ENST00000471694 PEX10O60683 326 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 PGDP52209 483 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 PLEKHG6Q3KR16 790 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SPANXN3Q5MJ09 141 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 PIK3R6Q5UE93 754 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 DUPD1Q68J44 220 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 KCNT2Q6UVM3 1135 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 RASSF6Q6ZTQ3 369 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 CHSY3Q70JA7 882 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 FAM35AQ86V20 835 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SH3RF2Q8TEC5 729 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 NDC1Q9BTX1 674 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 CDT1Q9H211 546 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 SLC2A4RGQ9NR83 387 aa8.65□□□□□ -1.02
CD47-204ENST00000471694 FGF18O76093 207 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 CYP1A1P04798 512 aaPredicted RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 DDX6P26196 483 aaKnown RBP eCLIP8.65□□□□□ -1.03
CD47-204ENST00000471694 STXBP1P61764 594 aaKnown RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 TPRG1Q6ZUI0 275 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 OXR1Q8N573 874 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 WFIKKN2Q8TEU8 576 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 RAD9AQ99638 391 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 PPCSQ9HAB8 311 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 GOLGA2P5Q9HBQ8 144 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 PCDH12Q9NPG4 1184 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 AGPAT5Q9NUQ2 364 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 SYNPO2Q9UMS6 1093 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 VWDEQ8N2E2 1590 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 SETBP1Q9Y6X0 1596 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 KIF1AQ12756 1690 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 HACD1B0YJ81 288 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ALBP02768 609 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 NR2F1P10589 423 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ATP6V1B2P21281 511 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 TTPAP49638 278 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 CHRNB3Q05901 458 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 TBX2Q13207 712 aaPredicted RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 TAS1R3Q7RTX0 852 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ARHGEF19Q8IW93 802 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ZC3H7AQ8IWR0 971 aaKnown RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 ATG16L2Q8NAA4 619 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ZSWIM2Q8NEG5 633 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 CD101Q93033 1021 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 KCTD14Q9BQ13 255 aaPredicted RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 MANSC1Q9H8J5 431 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ADPRHL2Q9NX46 363 aa8.65□□□□□ -1.03
CD47-204ENST00000471694 ZNF624Q9P2J8 865 aaPredicted RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 ZFP37Q9Y6Q3 630 aaPredicted RBP8.65□□□□□ -1.03
CD47-204ENST00000471694 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 USP1O94782 785 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 EPN2O95208 641 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 NQO1P15559 274 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 PSMA4P25789 261 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 CRABP2P29373 138 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 HNF1BP35680 557 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 SOX6P35712 828 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
CD47-204ENST00000471694 CLCNKBP51801 687 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 RIN1Q13671 783 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CEP78Q5JTW2 689 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 CES3Q6UWW8 571 aa8.64□□□□□ -1.03
CD47-204ENST00000471694 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms