RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CORO1AP31146 461 aaKnown RBP17.73■□□□□ 0.43
HSPG2-208ENST00000471322 CDH17Q12864 832 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 USP4Q13107 963 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 SERINC3Q13530 473 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 FAM133BQ5BKY9 247 aaKnown RBP17.73■□□□□ 0.43
HSPG2-208ENST00000471322 TMEM31Q5JXX7 168 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 ADGRF1Q5T601 910 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MARC1Q5VT66 337 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 TTC39BQ5VTQ0 682 aaPredicted RBP17.73■□□□□ 0.43
HSPG2-208ENST00000471322 ARMC3Q5W041 872 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 CHST9Q7L1S5 443 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MPP5Q8N3R9 675 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 OR52K1Q8NGK4 314 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MDM1Q8TC05 714 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MAGEH1Q9H213 219 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 TRABDQ9H4I3 376 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 SSU72Q9NP77 194 aaKnown RBP17.73■□□□□ 0.43
HSPG2-208ENST00000471322 NKIRAS1Q9NYS0 192 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MOCS1Q9NZB8 636 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 WNT16Q9UBV4 365 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 MYO15AQ9UKN7 3530 aa17.73■□□□□ 0.43
HSPG2-208ENST00000471322 TMEM120BA0PK00 339 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 FAM159BA6NKW6 160 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PFKLP17858 780 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PFKPQ01813 784 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 NAB1Q13506 487 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 FRG1Q14331 258 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 SPARCL1Q14515 664 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 SPANXN3Q5MJ09 141 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 CTAGE3PQ8IX95 158 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 TEX26Q8N6G2 289 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 CSGALNACT1Q8TDX6 532 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 CDKL2Q92772 493 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 ALKBH8Q96BT7 664 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 MRRFQ96E11 262 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF599Q96NL3 588 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 C1QTNF1Q9BXJ1 281 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 IL22Q9GZX6 179 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 SLC25A51Q9H1U9 297 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PLAC1Q9HBJ0 212 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 DUS2Q9NX74 493 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 STOML2Q9UJZ1 356 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 TICRRQ7Z2Z1 1910 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PRPF4O43172 522 aaKnown RBP eCLIP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 KRT37O76014 449 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PEX11BO96011 259 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 KLKB1P03952 638 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 SLC6A4P31645 630 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 EFTUD2Q15029 972 aaKnown RBP eCLIP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 TPRG1Q6ZUI0 275 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PRPF39Q86UA1 669 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF354CQ86Y25 554 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 PPM1NQ8N819 430 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 OXNAD1Q96HP4 312 aaPredicted RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 FAM83CQ9BQN1 747 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 HPS4Q9NQG7 708 aa17.72■□□□□ 0.43
HSPG2-208ENST00000471322 AGO1Q9UL18 857 aaKnown RBP17.72■□□□□ 0.43
HSPG2-208ENST00000471322 DMDP11532 3685 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 FAM47DPA6NHR8 397 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 GPR37L1O60883 481 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 C1QAP02745 245 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 HLA-DQB2P05538 268 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 SERPINB9P50453 376 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 DMTNQ08495 405 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 MPP3Q13368 585 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 MLF2Q15773 248 aaPredicted RBP17.71■□□□□ 0.43
HSPG2-208ENST00000471322 RFWD3Q6PCD5 774 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 SETD3Q86TU7 594 aaPredicted RBP17.71■□□□□ 0.43
HSPG2-208ENST00000471322 CCDC117Q8IWD4 279 aaPredicted RBP17.71■□□□□ 0.43
HSPG2-208ENST00000471322 OSCP1Q8WVF1 389 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 MTBPQ96DY7 904 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 SGSM3Q96HU1 749 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 TBL1YQ9BQ87 522 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 LRFN3Q9BTN0 628 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 CCDC134Q9H6E4 229 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 TBC1D17Q9HA65 648 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 VPS45Q9NRW7 570 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 SYBUQ9NX95 663 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 PIAS3Q9Y6X2 628 aa17.71■□□□□ 0.43
HSPG2-208ENST00000471322 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.7■□□□□ 0.42
HSPG2-208ENST00000471322 J3KR12 359 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 PRAMEF11O60813 436 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 KRT38O76015 456 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 MT-ND3P03897 115 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 CNTFP26441 200 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 ETFBP38117 255 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 ZNF177Q13360 481 aaPredicted RBP17.7■□□□□ 0.42
HSPG2-208ENST00000471322 CRYMQ14894 314 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 BBS5Q8N3I7 341 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 BCAS4Q8TDM0 211 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 DNASE1L2Q92874 299 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 ZNF510Q9Y2H8 683 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 SH3BP1Q9Y3L3 701 aa17.7■□□□□ 0.42
HSPG2-208ENST00000471322 HELZP42694 1942 aaKnown RBP17.7■□□□□ 0.42
HSPG2-208ENST00000471322 FAM237BA0A1B0GVD1 139 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 A0A1B0GVM2 712 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 ILVBLA1L0T0 632 aa17.69■□□□□ 0.42
HSPG2-208ENST00000471322 TCAF2A6NFQ2 919 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms