RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NR1I3Q14994 352 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 SMAD1Q15797 465 aaKnown RBP13.71□□□□□ -0.21
HMGN1-211ENST00000471260 MYLK3Q32MK0 819 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 SPECC1LQ69YQ0 1117 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ABI3BPQ7Z7G0 1075 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 PSTKQ8IV42 348 aaKnown RBP13.71□□□□□ -0.21
HMGN1-211ENST00000471260 PYROXD2Q8N2H3 581 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ASB12Q8WXK4 309 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 CNDP2Q96KP4 475 aaKnown RBP13.71□□□□□ -0.21
HMGN1-211ENST00000471260 SLC17A9Q9BYT1 436 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 TM6SF2Q9BZW4 377 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 TTYH3Q9C0H2 523 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 HAUS4Q9H6D7 363 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 ZDHHC6Q9H6R6 413 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 KLHL11Q9NVR0 708 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 TAS2R14Q9NYV8 317 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 MFHAS1Q9Y4C4 1052 aa13.71□□□□□ -0.21
HMGN1-211ENST00000471260 TRPM6Q9BX84 2022 aa13.71□□□□□ -0.22
HMGN1-211ENST00000471260 SPEGQ15772 3267 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 DOCK9Q9BZ29 2069 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 USP24Q9UPU5 2620 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 TMEM191CA6NGB0 347 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 C16orf96A6NNT2 1141 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 USP27XA6NNY8 438 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 RNF103O00237 685 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 RNF8O76064 485 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 CAPNS1P04632 268 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 MYBL1P10243 752 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 PSMA2P25787 234 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 NDST2P52849 883 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 OGDHQ02218 1023 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 KLHL30Q0D2K2 578 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 BNIP3Q12983 259 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 SERINC3Q13530 473 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 GRM3Q14832 879 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 KANSL1Q7Z3B3 1105 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF571Q7Z3V5 609 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 ZNF354CQ86Y25 554 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 RYBPQ8N488 228 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 IQCDQ96DY2 449 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 TRIM11Q96F44 468 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 GDAP1L1Q96MZ0 367 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 LENG8Q96PV6 779 aaPredicted RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 NOL6Q9H6R4 1146 aaKnown RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 MRPL47Q9HD33 250 aaKnown RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 ACTL7AQ9Y615 435 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 BZW2Q9Y6E2 419 aaKnown RBP13.7□□□□□ -0.22
HMGN1-211ENST00000471260 SCINQ9Y6U3 715 aa13.7□□□□□ -0.22
HMGN1-211ENST00000471260 GOLGA8CPA6NN73 597 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 A6NNZ2 444 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TMCO5BA8MYB1 307 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 RASA4BC9J798 803 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 KRIT1O00522 736 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 RASA4O43374 803 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TMCC1O94876 653 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 IGSF6O95976 241 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PAK4O96013 591 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-211ENST00000471260 FTLP02792 175 aaPredicted RBP13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TPM1P09493 284 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PRLRP16471 622 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 SUOXP51687 545 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TPI1P60174 286 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 SGCGQ13326 291 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 ILKQ13418 452 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TRIM14Q14142 442 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 ACAP1Q15027 740 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 ERMARDQ5T6L9 678 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 GDPD4Q6W3E5 623 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 KYAT3Q6YP21 454 aaKnown RBP13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PARS2Q7L3T8 475 aaKnown RBP13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TMPRSS12Q86WS5 348 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 EID2Q8N6I1 236 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 DENND6BQ8NEG7 585 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 HCAR2Q8TDS4 363 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 TSC1Q92574 1164 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 KLK6Q92876 244 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PANX2Q96RD6 677 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 C1QTNF2Q9BXJ5 285 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 CPEB1Q9BZB8 566 aaKnown RBP13.69□□□□□ -0.22
HMGN1-211ENST00000471260 OGFRQ9NZT2 677 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 DKK3Q9UBP4 350 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 DKK4Q9UBT3 224 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 KNTC1P50748 2209 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PTPRBP23467 1997 aa13.69□□□□□ -0.22
HMGN1-211ENST00000471260 PLXNB3Q9ULL4 1909 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 A0A1W2PQJ5 194 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 SRRM3A6NNA2 597 aaPredicted RBP13.68□□□□□ -0.22
HMGN1-211ENST00000471260 DDX3XO00571 662 aaKnown RBP eCLIP13.68□□□□□ -0.222e-15■□□□□ 10.9
HMGN1-211ENST00000471260 NEMP1O14524 444 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 RFPL3O75679 317 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 UGT2B4P06133 528 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 CKMT2P17540 419 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 RABIFP47224 123 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 HCAR3P49019 387 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 RHOAP61586 193 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 SEL1L3Q68CR1 1132 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 GCNT7Q6ZNI0 430 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 TTC7BQ86TV6 843 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 DNAAF5Q86Y56 855 aa13.68□□□□□ -0.22
HMGN1-211ENST00000471260 TMEM139Q8IV31 216 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms