RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 TSPAN11A1L157 253 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 RNF103O00237 685 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 PDE2AO00408 941 aaPredicted RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 ZNF217O75362 1048 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 LEFTY1O75610 366 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 ADH1BP00325 375 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 HLA-DQB2P05538 268 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 MMP2P08253 660 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 DEKP35659 375 aaKnown RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 SCNN1BP51168 640 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 CST6Q15828 149 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 ZNF805Q5CZA5 627 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 PRPF39Q86UA1 669 aaKnown RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 WDR5BQ86VZ2 330 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 ZBTB44Q8NCP5 570 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 MDGA1Q8NFP4 955 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 PIP4K2CQ8TBX8 421 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 PRCCQ92733 491 aaPredicted RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 ECHDC3Q96DC8 303 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 IMP4Q96G21 291 aaKnown RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 HHIPQ96QV1 700 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 FCRL5Q96RD9 977 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 SEMA3CQ99985 751 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 FAM118BQ9BPY3 351 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 TM6SF2Q9BZW4 377 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 PABPC3Q9H361 631 aaKnown RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 SUV39H2Q9H5I1 410 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 C10orf88Q9H8K7 445 aa12.78□□□□□ -0.36
SND1-209ENST00000470723 FEZ2Q9UHY8 353 aaPredicted RBP12.78□□□□□ -0.36
SND1-209ENST00000470723 A0A1W2PQ67 120 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 C1QTNF3-AMACRE9PGA6 284 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 KRIT1O00522 736 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 AXIN1O15169 862 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 KCNN4O15554 427 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 FZD6O60353 706 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 OPHN1O60890 802 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 IL1BP01584 269 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 EPOP01588 193 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 SP9P0CG40 484 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ITGB7P26010 798 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 OXTRP30559 389 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 CNR2P34972 360 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 DRD3P35462 400 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 COILP38432 576 aaPredicted RBP12.77□□□□□ -0.37
SND1-209ENST00000470723 TPMTP51580 245 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 SUOXP51687 545 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 LMNB2Q03252 620 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 CSTF1Q05048 431 aaKnown RBP12.77□□□□□ -0.37
SND1-209ENST00000470723 CCDC15Q0P6D6 951 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANGPT1Q15389 498 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 P3H1Q32P28 736 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 MAP7D1Q3KQU3 841 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANKRD20A2Q5SQ80 823 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANKRD20A1Q5TYW2 823 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANKRD20A3Q5VUR7 823 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANO7Q6IWH7 933 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 PID1Q7Z2X4 250 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ZNF572Q7Z3I7 529 aaPredicted RBP12.77□□□□□ -0.37
SND1-209ENST00000470723 KBTBD6Q86V97 674 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 LONP2Q86WA8 852 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 FAM71DQ8N9W8 422 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 HMGB4Q8WW32 186 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
SND1-209ENST00000470723 SPATA13Q96N96 652 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 AGAP3Q96P47 875 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 TMEM121Q9BTD3 319 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 SCUBE2Q9NQ36 999 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 VPS45Q9NRW7 570 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 CDC23Q9UJX2 597 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 FZD4Q9ULV1 537 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ZNF148Q9UQR1 794 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 PPIL1Q9Y3C6 166 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
SND1-209ENST00000470723 ANKRD36A6QL64 1941 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 MID1O15344 667 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 SLC7A4O43246 635 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 LILRB5O75023 590 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 SOCS5O75159 536 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 GJB3O75712 270 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
SND1-209ENST00000470723 DNTTP04053 509 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 SERPINF2P08697 491 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 TIMP2P16035 220 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 GKP32189 559 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 P2RY2P41231 377 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 PAFAH1B1P43034 410 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 FNTAP49354 379 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 GDF10P55107 478 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 MAXP61244 160 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 SKOR1P84550 965 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 DSC2Q02487 901 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 BCL2L1Q07817 233 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 DMWDQ09019 674 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 SNX1Q13596 522 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 PARP6Q2NL67 630 aa12.76□□□□□ -0.37
SND1-209ENST00000470723 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms