RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SLC13A1Q9BZW2 595 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 VPS16Q9H269 839 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 MMRN2Q9H8L6 949 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 TMEM8AQ9HCN3 771 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 ZNF446Q9NWS9 450 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 AKAP7Q9P0M2 348 aaPredicted RBP9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 PISDQ9UG56 409 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 DOLKQ9UPQ8 538 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 ADGRG1Q9Y653 693 aa9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 NYNRINQ9P2P1 1898 aaKnown RBP9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 TEP1Q99973 2627 aaKnown RBP9.1□□□□□ -0.95
SYNGAP1-205ENST00000470232 LMO7DNF2Z398 122 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 FANCGO15287 622 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 ATP8B1O43520 1251 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 PAK4O96013 591 aaPredicted RBP9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 TACR2P21452 398 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 RPL13P26373 211 aaKnown RBP9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 CASP14P31944 242 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 CCKBRP32239 447 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 CHRNA3P32297 505 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 ATP1A2P50993 1020 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 EMP3P54852 163 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 KRT83P78385 493 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 STIM1Q13586 685 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 PRRT3Q5FWE3 981 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 C1orf220Q5T0J3 134 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 Q6ZVU0 165 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 TMTC1Q8IUR5 882 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 SLC35F3Q8IY50 421 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 HSFY1Q96LI6 401 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 TBATAQ96M53 351 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 CATSPER2Q96P56 530 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 LENG8Q96PV6 779 aaPredicted RBP9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 CMKLR1Q99788 373 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 HDAC8Q9BY41 377 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 B3GNT4Q9C0J1 378 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 GPR27Q9NS67 375 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 EXOC1Q9NV70 894 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 APOBEC3BQ9UH17 382 aaKnown RBP9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 ZFR2Q9UPR6 939 aaKnown RBP9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 LOXL2Q9Y4K0 774 aa9.09□□□□□ -0.95
SYNGAP1-205ENST00000470232 POM121BA6NF01 834 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 TCAF2A6NFQ2 919 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SART1O43290 800 aaKnown RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PNMA6AP0CW24 399 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 HOXB1P14653 301 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 FECHP22830 423 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PSMC2P35998 433 aaKnown RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 RECQLP46063 649 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 BLKP51451 505 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 THOP1P52888 689 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PDX1P52945 283 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 POLE2P56282 527 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 CYP4F2P78329 520 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PPP3CAQ08209 521 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SRSF6Q13247 344 aaKnown RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 DRAP1Q14919 205 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 ELOCQ15369 112 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 TMEM259Q4ZIN3 620 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZNF569Q5MCW4 686 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 FAXCQ5TGI0 409 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 RAP1GAP2Q684P5 730 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 LVRNQ6Q4G3 990 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 VASH2Q86V25 355 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 CREBRFQ8IUR6 639 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 FAM186BQ8IYM0 893 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLC35F6Q8N357 371 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SDR16C5Q8N3Y7 309 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SH2D3CQ8N5H7 860 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 CEP112Q8N8E3 955 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 ATP11CQ8NB49 1132 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 ACRBPQ8NEB7 543 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 FBXL13Q8NEE6 735 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 MYEOVQ96EZ4 313 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLC39A13Q96H72 371 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 FEM1AQ9BSK4 669 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 KCTD10Q9H3F6 313 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 LZTFL1Q9NQ48 299 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 TMPRSS4Q9NRS4 437 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 RAB20Q9NX57 234 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 GULP1Q9UBP9 304 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PLEKHB1Q9UF11 243 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 VPS28Q9UK41 221 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 TRPM6Q9BX84 2022 aa9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 COL27A1Q8IZC6 1860 aaPredicted RBP9.08□□□□□ -0.96
SYNGAP1-205ENST00000470232 PRAMEF33A0A0G2JMD5 474 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 CTAGE9A4FU28 777 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 KCNU1A8MYU2 1149 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 D6RAR5 112 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 STMND1H3BQB6 276 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 TOR1BO14657 336 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 YY2O15391 372 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 PRAMEF10O60809 474 aa9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 SEC31AO94979 1220 aaKnown RBP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
SYNGAP1-205ENST00000470232 GYPCP04921 128 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms