RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 MATN3O15232 486 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 HTRA2O43464 458 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 KRT86O43790 486 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NRDCO43847 1150 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NDUFS2O75306 463 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PALMO75781 387 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SERPINF2P08697 491 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 CCNCP24863 283 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 CD27P26842 260 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 MMP13P45452 471 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NR2C2P49116 596 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 DHPSP49366 369 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 RENBPP51606 427 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 LIMK1P53667 647 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PPP2CBP62714 309 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PPP2CAP67775 309 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 CREB5Q02930 508 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SLC10A7Q0GE19 358 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SLC10A2Q12908 348 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 TFDP2Q14188 446 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ZNF235Q14590 738 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NUMA1Q14980 2115 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PRKD1Q15139 912 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SLC14A2Q15849 920 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ARSIQ5FYB1 569 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SYCP2LQ5T4T6 812 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 DCAF12L1Q5VU92 463 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 SLC23A3Q6PIS1 610 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NCEH1Q6PIU2 408 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 BRAT1Q6PJG6 821 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 GDPD4Q6W3E5 623 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PRR23CQ6ZRP0 262 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 BBS12Q6ZW61 710 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 FAM124AQ86V42 546 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ALYREFQ86V81 257 aaKnown RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ZNF354CQ86Y25 554 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 RCOR2Q8IZ40 523 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 PGBD5Q8N414 524 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 HDDC3Q8N4P3 179 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NETO2Q8NC67 525 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 CEP76Q8TAP6 659 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 BIRC7Q96CA5 298 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 EXOC2Q96KP1 924 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ZNF641Q96N77 438 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ZNF830Q96NB3 372 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 QKIQ96PU8 341 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 NUDCD1Q96RS6 583 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 CINPQ9BW66 212 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 ARRDC1-AS1Q9H2J1 176 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 DYRK4Q9NR20 520 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 TMEM74BQ9NUR3 256 aa8.4□□□□□ -1.06
TRAPPC3-206ENST00000469757 TP53BP1Q12888 1972 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ANKRD36A6QL64 1941 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ATXN2Q99700 1313 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 A0A1W2PPC4 97 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 C16orf96A6NNT2 1141 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 APOC4-APOC2K7ER74 178 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 PLK4O00444 970 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 TRAFD1O14545 582 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 PPP1R12AO14974 1030 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 INSIG1O15503 277 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 DDX3YO15523 660 aaKnown RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 BNIP3LO60238 219 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ZRANB2O95218 330 aaKnown RBP eCLIP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 APOC2P02655 101 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 UGT2B4P06133 528 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 PECAM1P16284 738 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 SERPINA4P29622 427 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 GKP32189 559 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 MMP12P39900 470 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ABL2P42684 1182 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 GRIA4P48058 902 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 RAD51Q06609 339 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ADCY2Q08462 1091 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 SPEM2Q0P670 501 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 PDK1Q15118 436 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 MARC1Q5VT66 337 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 KIAA1161Q6NSJ0 714 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ARMCX6Q7L4S7 300 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 PEX26Q7Z412 305 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 BBS5Q8N3I7 341 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 TMEM145Q8NBT3 493 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 RNF25Q96BH1 459 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 NSMCE3Q96MG7 304 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 IL12RB2Q99665 862 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 HERPUD2Q9BSE4 406 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 KCNF1Q9H3M0 494 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 ATP13A3Q9H7F0 1226 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 HAUS2Q9NVX0 235 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 DMTF1Q9Y222 760 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 FADS3Q9Y5Q0 445 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 SLCO1B1Q9Y6L6 691 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 SHROOM3Q8TF72 1996 aa8.39□□□□□ -1.07
TRAPPC3-206ENST00000469757 A0A1B0GTW7 788 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 A0A1W2PQ67 120 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 UPK3BL1B0FP48 263 aa8.38□□□□□ -1.07
TRAPPC3-206ENST00000469757 PRR5-ARHGAP8B1AHC4 643 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms