RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 ALKBH5Q6P6C2 394 aaKnown RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 PIP4P1Q86T03 277 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 SPATA4Q8NEY3 305 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 OR2I1PQ8NGU4 316 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 SLC32A1Q9H598 525 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 DONSONQ9NYP3 566 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 IL36AQ9UHA7 158 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 INTUQ9ULD6 942 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 TRPM6Q9BX84 2022 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 ZSCAN5CA6NGD5 496 aaPredicted RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 LATO43561 262 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 KDELR3O43731 214 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 ZNF883P0CG24 379 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 YBEYP58557 167 aaPredicted RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 RACK1P63244 317 aaKnown RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 MEI1Q5TIA1 1274 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 DPY19L3Q6ZPD9 716 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 ZNF771Q7L3S4 317 aaPredicted RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 PSTKQ8IV42 348 aaKnown RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 ARFGAP1Q8N6T3 406 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 CHST14Q8NCH0 376 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 PACSIN1Q9BY11 444 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 TNKS2Q9H2K2 1166 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 NOL6Q9H6R4 1146 aaKnown RBP14.72□□□□□ -0.05
COL27A1-203ENST00000468565 AP4E1Q9UPM8 1137 aa14.72□□□□□ -0.05
COL27A1-203ENST00000468565 A0A1B0GVT2 93 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 GRID2IPA4D2P6 1211 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 PLK4O00444 970 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 POLR3GO15318 223 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-203ENST00000468565 H2AFZP0C0S5 128 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 CD59P13987 128 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 CXCR5P32302 372 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 NUDT1P36639 197 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 CSNK1EP49674 416 aaKnown RBP14.71□□□□□ -0.05
COL27A1-203ENST00000468565 TPI1P60174 286 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 ACAP1Q15027 740 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 PARP15Q460N3 678 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 CARD16Q5EG05 197 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 N4BP2L1Q5TBK1 243 aaPredicted RBP14.71□□□□□ -0.05
COL27A1-203ENST00000468565 H2AFVQ71UI9 128 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 TRIM69Q86WT6 500 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 UMODL1-AS1Q8N2C9 162 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 CASKIN2Q8WXE0 1202 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 PPP1R16AQ96I34 528 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 VIPAS39Q9H9C1 493 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 EBF2Q9HAK2 575 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 DYRK4Q9NR20 520 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 FCF1Q9Y324 198 aaKnown RBP14.71□□□□□ -0.05
COL27A1-203ENST00000468565 WASF2Q9Y6W5 498 aa14.71□□□□□ -0.05
COL27A1-203ENST00000468565 TBC1D3DA0A087WVF3 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3IA0A087WXS9 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3EA0A087X179 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3KA0A087X1G2 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3FA6NER0 549 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3LB9A6J9 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 KPNA3O00505 521 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PRPSAP2O60256 369 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 LRCH4O75427 683 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3HP0C7X1 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 MIPP30301 263 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ZNF135P52742 658 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 POM121L1PQ3SYA9 428 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PIP5KL1Q5T9C9 394 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3GQ6DHY5 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3CQ6IPX1 549 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TBC1D3Q8IZP1 549 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 DEFB124Q8NES8 71 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ARRDC3Q96B67 414 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PEBP4Q96S96 227 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 HEPHQ9BQS7 1158 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 SNRNP25Q9BV90 132 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TRIM7Q9C029 511 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 GAREM1Q9H706 876 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PREBQ9HCU5 417 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 NENFQ9UMX5 172 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ANKRD6Q9Y2G4 727 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ANKRD36A6QL64 1941 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 A0A0A6YYK5 440 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 CES2O00748 559 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 GIPC1O14908 333 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 VILLO15195 856 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 FTCDO95954 541 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 GSRP00390 522 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PCK1P35558 622 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 TNNT3P45378 269 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 NOP2P46087 812 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 CCNHP51946 323 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PPP2CBP62714 309 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PPP2CAP67775 309 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 HNRNPDQ14103 355 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 KIF19Q2TAC6 998 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 HLA-BQ31612 363 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 GLE1Q53GS7 698 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 ARSIQ5FYB1 569 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 CCNI2Q6ZMN8 369 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 CYP4V2Q6ZWL3 525 aaPredicted RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 PRPF39Q86UA1 669 aaKnown RBP14.7□□□□□ -0.06
COL27A1-203ENST00000468565 SKA1Q96BD8 255 aa14.7□□□□□ -0.06
COL27A1-203ENST00000468565 LRIG1Q96JA1 1093 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms