RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 CTNNA1P35221 906 aaKnown RBP20.29■□□□□ 0.84
NPHP4-206ENST00000468253 PEX5P50542 639 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 LMNB2Q03252 620 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 SLC10A7Q0GE19 358 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 RALGPS1Q5JS13 557 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 MARC1Q5VT66 337 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3GQ6DHY5 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3CQ6IPX1 549 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 PRR23CQ6ZRP0 262 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 TBC1D3Q8IZP1 549 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-206ENST00000468253 MAML1Q92585 1016 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 RBM41Q96IZ5 413 aaKnown RBP20.29■□□□□ 0.84
NPHP4-206ENST00000468253 CINPQ9BW66 212 aaPredicted RBP20.29■□□□□ 0.84
NPHP4-206ENST00000468253 GOLPH3Q9H4A6 298 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 SLC6A14Q9UN76 642 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 EFR3BQ9Y2G0 817 aa20.29■□□□□ 0.84
NPHP4-206ENST00000468253 GRID2IPA4D2P6 1211 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 C16orf96A6NNT2 1141 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 RNF103O00237 685 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 LATO43561 262 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 KRT86O43790 486 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 MFSD11O43934 449 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 IGHV4-34P06331 123 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 CES1P23141 567 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 NEK3P51956 506 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 TAS2R38P59533 333 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 GBE1Q04446 702 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 POM121L1PQ3SYA9 428 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 TFDP3Q5H9I0 405 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 FBXL19Q6PCT2 694 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 SPOCD1Q6ZMY3 1216 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 ZSCAN30Q86W11 494 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 TRIM69Q86WT6 500 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 KIAA2013Q8IYS2 634 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
NPHP4-206ENST00000468253 HDAC11Q96DB2 347 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 ZNF830Q96NB3 372 aaPredicted RBP20.28■□□□□ 0.84
NPHP4-206ENST00000468253 SUV39H2Q9H5I1 410 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 HAUS2Q9NVX0 235 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 AMFRQ9UKV5 643 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 THADAQ6YHU6 1953 aa20.28■□□□□ 0.84
NPHP4-206ENST00000468253 A0A1B0GTW7 788 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 A0A1W2PPC4 97 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 PLK4O00444 970 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 FSBPO95073 299 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 UGT2B4P06133 528 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 ADRB3P13945 408 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 SDHBP21912 280 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 MAOBP27338 520 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 GKP32189 559 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 AP1S1P61966 158 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 CCZ1BP86790 482 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 CCZ1P86791 482 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-206ENST00000468253 PDK1Q15118 436 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 PPP2R5EQ16537 467 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 PRPF39Q86UA1 669 aaKnown RBP20.27■□□□□ 0.84
NPHP4-206ENST00000468253 NT5DC3Q86UY8 548 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 RFX6Q8HWS3 928 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 C12orf50Q8NA57 414 aaPredicted RBP20.27■□□□□ 0.84
NPHP4-206ENST00000468253 OR6K2Q8NGY2 324 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 SPOCK2Q92563 424 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 KRT35Q92764 455 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 FEM1CQ96JP0 617 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 KLHL32Q96NJ5 620 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 ORAI3Q9BRQ5 295 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 NUSAP1Q9BXS6 441 aaKnown RBP20.27■□□□□ 0.84
NPHP4-206ENST00000468253 CAPN10Q9HC96 672 aa20.27■□□□□ 0.84
NPHP4-206ENST00000468253 EIF2B4Q9UI10 523 aaKnown RBP20.27■□□□□ 0.84
NPHP4-206ENST00000468253 NUMA1Q14980 2115 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-206ENST00000468253 MACROD2A1Z1Q3 448 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 MIF4GDA9UHW6 222 aaKnown RBP20.26■□□□□ 0.83
NPHP4-206ENST00000468253 BCAT2O15382 392 aaPredicted RBP20.26■□□□□ 0.83
NPHP4-206ENST00000468253 INSIG1O15503 277 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 TSPAN6O43657 245 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 CCDC175P0C221 793 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 CR2P20023 1033 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 CETN2P41208 172 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 MMP13P45452 471 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 RWDD2BP57060 319 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 IRX4P78413 519 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 ZNF235Q14590 738 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 TRIM61Q5EBN2 209 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 TTC7BQ86TV6 843 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 NUDCD1Q96RS6 583 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 MGME1Q9BQP7 344 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 ATP13A3Q9H7F0 1226 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 DMTF1Q9Y222 760 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 FADS3Q9Y5Q0 445 aa20.26■□□□□ 0.83
NPHP4-206ENST00000468253 A0A1W2PQ67 120 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 TSPAN11A1L157 253 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 MUSKO15146 869 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 CST8O60676 142 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 TIMP2P16035 220 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 TGM2P21980 687 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 PTPN7P35236 360 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 RGRP47804 291 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 SCNN1BP51168 640 aa20.25■□□□□ 0.83
NPHP4-206ENST00000468253 LIMK1P53667 647 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms