RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 PRAMEF26H0Y7S4 382 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 RASA4O43374 803 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 BUB1O43683 1085 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CD160O95971 181 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 TCF4P15884 667 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 IL1R2P27930 398 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 EPHA8P29322 1005 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CHRNA3P32297 505 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 HTR7P34969 479 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 ZNF75DP51815 510 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 METAP1P53582 386 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 YBEYP58557 167 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 SMTNL2Q2TAL5 461 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CARD16Q5EG05 197 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 ARSIQ5FYB1 569 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 LAYNQ6UX15 382 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CYP4V2Q6ZWL3 525 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CACTIN-AS1Q8N1I8 211 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 RYBPQ8N488 228 aaPredicted RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 HMCESQ96FZ2 354 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CELF6Q96J87 481 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 EIF3CQ99613 913 aaKnown RBP14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 KLC2Q9H0B6 622 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 DONSONQ9NYP3 566 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 CHD5Q8TDI0 1954 aa14.3□□□□□ -0.12
CCHCR1-211ENST00000467553 TRABD2BA6NFA1 517 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 GOLGA8CPA6NN73 597 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 KPNA3O00505 521 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 ZNF821O75541 412 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 RFPL3O75679 317 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 PRNPP04156 253 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 CTSLP07711 333 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 RARAP10276 462 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 ERCC2P18074 760 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 GEMIN4P57678 1058 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 CAMK2BQ13554 666 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 SHBQ15464 509 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 HADHQ16836 314 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 AGBL4Q5VU57 503 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 TXNRD3NBQ6F5E7 133 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 DPY19L3Q6ZPD9 716 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 ZSCAN30Q86W11 494 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 PSTKQ8IV42 348 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 UMODL1-AS1Q8N2C9 162 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 PCDH20Q8N6Y1 951 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 TC2NQ8N9U0 490 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 NETO2Q8NC67 525 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 CNDP2Q96KP4 475 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 TM6SF2Q9BZW4 377 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 CEP44Q9C0F1 390 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 DYRK4Q9NR20 520 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 CWC15Q9P013 229 aaKnown RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 UVRAGQ9P2Y5 699 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 HECAQ9UBI9 543 aaPredicted RBP14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 IL36AQ9UHA7 158 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 ATRXP46100 2492 aa14.29□□□□□ -0.12
CCHCR1-211ENST00000467553 ZSCAN5CA6NGD5 496 aaPredicted RBP14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 TMEM110-MUSTN1A8MSY1 372 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 APC2O95996 2303 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 TMEM253P0C7T8 217 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 AMPD1P23109 780 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 ARL4AP40617 200 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 NDST2P52849 883 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 IL9RQ01113 521 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 CNTN1Q12860 1018 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 SERINC3Q13530 473 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 PARP15Q460N3 678 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 RFX8Q6ZV50 586 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 NIPA2Q8N8Q9 360 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 GRIN3AQ8TCU5 1115 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 TSC1Q92574 1164 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 IFT43Q96FT9 208 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 PPP1R16AQ96I34 528 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 HEPHQ9BQS7 1158 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 HDAC8Q9BY41 377 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCHCR1-211ENST00000467553 URB1O60287 2271 aaKnown RBP14.27□□□□□ -0.12
CCHCR1-211ENST00000467553 CELSR3Q9NYQ7 3312 aa14.27□□□□□ -0.12
CCHCR1-211ENST00000467553 ARHGAP42A6NI28 874 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 H3BRJ5 948 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 J3KR12 359 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 RNF103O00237 685 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 DFFAO00273 331 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 RIOK3O14730 519 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 LEFTY1O75610 366 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 JUPP14923 745 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 CKMT2P17540 419 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 GJC1P36383 396 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 HCAR3P49019 387 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 CCNHP51946 323 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 ZNF135P52742 658 aaPredicted RBP14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 SNRPD1P62314 119 aaKnown RBP14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 PPP2CBP62714 309 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 PPP2CAP67775 309 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 MESDQ14696 234 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 DPYSL2Q16555 572 aa14.27□□□□□ -0.13
CCHCR1-211ENST00000467553 ATP13A4Q4VNC1 1196 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms