RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 KYAT1Q16773 422 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 NOTUMQ6P988 496 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 SIX6OS1Q8N1H7 587 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 ANKRD52Q8NB46 1076 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 TNIP2Q8NFZ5 429 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 ZFP42Q96MM3 310 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 ANKRD60Q9BZ19 345 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 TMEM9Q9P0T7 183 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 VPS51Q9UID3 782 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 PACSIN3Q9UKS6 424 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 CORINQ9Y5Q5 1042 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 WDR27A2RRH5 827 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 TRIM64BA6NI03 449 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 MEIS3P2A8K0S8 358 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 DCXO43602 365 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 RFPL1O75677 317 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 GABRB3P28472 473 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 THOP1P52888 689 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 KLF10Q13118 480 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 E2F2Q14209 437 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 STILQ15468 1287 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 LSM12Q3MHD2 195 aaKnown RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 DCAF4L1Q3SXM0 396 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 GPR107Q5VW38 600 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 NCBP2-AS2Q69YL0 99 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 PIGZQ86VD9 579 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 PHTF2Q8N3S3 785 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 KYQ8NBH2 561 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 EMID1Q96A84 441 aaPredicted RBP18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 CDRT15Q96T59 188 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 SNX25Q9H3E2 840 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 SIAEQ9HAT2 523 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 PNPLA8Q9NP80 782 aa18.26■□□□□ 0.51
SNAPC3-205ENST00000467062 CITO14578 2027 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 NOTOA8MTQ0 251 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 CD247P20963 164 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 NUDT2P50583 147 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 AFF1P51825 1210 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 BEX3Q00994 111 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 BST2Q10589 180 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 DPYSL2Q16555 572 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 FASTKD1Q53R41 847 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 PIGGQ5H8A4 983 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 FAM209AQ5JX71 171 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 TEDDM1Q5T9Z0 273 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 SYPL2Q5VXT5 272 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 HEATR6Q6AI08 1181 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 ALKAL1Q6UXT8 129 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 CADM3Q8N126 398 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 RTP4Q96DX8 246 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 SACM1LQ9NTJ5 587 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 CPQQ9Y646 472 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 BPTFQ12830 3046 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 LYPLA1O75608 230 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 BCAS2O75934 225 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 DARSP14868 501 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 GTF2A2P52657 109 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 MMAAQ8IVH4 418 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 NDUFAF2Q8N183 169 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 CCNYQ8ND76 341 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 CALML6Q8TD86 181 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 NPLQ9BXD5 320 aaPredicted RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 PLEKHA5Q9HAU0 1116 aa18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 MRPL42Q9Y6G3 142 aaKnown RBP18.25■□□□□ 0.51
SNAPC3-205ENST00000467062 COL1A2P08123 1366 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 FAM155AB1AL88 458 aaPredicted RBP18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 AIM2O14862 343 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 KLHL41O60662 606 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 RNASEH2AO75792 299 aaKnown RBP18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 HFE2Q6ZVN8 426 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 SLC26A9Q7LBE3 791 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 IGFN1Q86VF2 1251 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 C11orf74Q86VG3 221 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 OSTM1Q86WC4 334 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 NT5DC4Q86YG4 428 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 ATP6V0D2Q8N8Y2 350 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 PDPRQ8NCN5 879 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 C11orf84Q9BUA3 381 aaPredicted RBP18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 MFSD11O43934 449 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 RSL1D1O76021 490 aaKnown RBP18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 CHEK2O96017 543 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 PTPN1P18031 435 aaKnown RBP18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 ME2P23368 584 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 SULT1E1P49888 294 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 BCAT1P54687 386 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 AGAP7PQ5VUJ5 663 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 MYO1HQ8N1T3 1032 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 APPL2Q8NEU8 664 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 TANKQ92844 425 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 PTPN18Q99952 460 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 ABHD16BQ9H3Z7 469 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 ATP11BQ9Y2G3 1177 aa18.24■□□□□ 0.51
SNAPC3-205ENST00000467062 C1orf232A0A0U1RR37 186 aa18.23■□□□□ 0.51
SNAPC3-205ENST00000467062 KCNK1O00180 336 aa18.23■□□□□ 0.51
SNAPC3-205ENST00000467062 PIRO00625 290 aa18.23■□□□□ 0.51
SNAPC3-205ENST00000467062 USP12O75317 370 aa18.23■□□□□ 0.51
SNAPC3-205ENST00000467062 PARNO95453 639 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms