RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 EBF1Q9UH73 591 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 NEU2Q9Y3R4 380 aa15.38■□□□□ 0.05
NPHP4-205ENST00000466897 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 C1QTNF3-AMACRE9PGA6 284 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 ALDH1A2O94788 518 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 APBB3O95704 486 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 GAS8O95995 478 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 ADH1BP00325 375 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CTSLP07711 333 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 SERPINF2P08697 491 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 KCNJ1P48048 391 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 SCNN1BP51168 640 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 MAXP61244 160 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 SATB1Q01826 763 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 FAM46CQ5VWP2 391 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 SYDE1Q6ZW31 735 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CCDC89Q8N998 374 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CHST14Q8NCH0 376 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 MNS1Q8NEH6 495 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 TSTD1Q8NFU3 115 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CCDC110Q8TBZ0 833 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 MRGPRX1Q96LB2 322 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CEP41Q9BYV8 373 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 MKRN2Q9H000 416 aaKnown RBP15.37■□□□□ 0.05
NPHP4-205ENST00000466897 DDX47Q9H0S4 455 aaKnown RBP15.37■□□□□ 0.05
NPHP4-205ENST00000466897 L2HGDHQ9H9P8 463 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 NOD2Q9HC29 1040 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 C2orf42Q9NWW7 574 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 PAK5Q9P286 719 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 DKK3Q9UBP4 350 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 RSPH14Q9UHP6 348 aa15.37■□□□□ 0.05
NPHP4-205ENST00000466897 EVLQ9UI08 416 aaPredicted RBP15.37■□□□□ 0.05
NPHP4-205ENST00000466897 CACNA1IQ9P0X4 2223 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 CCDC163A0A0D9SF12 145 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 TCRBV21S2A2A0A5A6 115 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 TSPAN11A1L157 253 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 K7ESF4 209 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 HTRA2O43464 458 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 BNIP3LO60238 219 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 LEFTY1O75610 366 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ECEL1O95672 775 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 MMP2P08253 660 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 GABRG2P18507 467 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 NFKB1P19838 968 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 C5AR1P21730 350 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 CA4P22748 312 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 SERPINA4P29622 427 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 AVPR2P30518 371 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 RPS14P62263 151 aaKnown RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 DSC2Q02487 901 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ITKQ08881 620 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 NIPAL4Q0D2K0 466 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 CST6Q15828 149 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 PARP6Q2NL67 630 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ARHGEF18Q6ZSZ5 1173 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 GSTA5Q7RTV2 222 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 TMPRSS6Q8IU80 811 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 RYBPQ8N488 228 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 DTWD2Q8NBA8 298 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 PIP4K2CQ8TBX8 421 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 PRCCQ92733 491 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 FAM131CQ96AQ9 280 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ECHDC3Q96DC8 303 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 PPP1R16AQ96I34 528 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ZDHHC6Q9H6R6 413 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 SPATA6Q9NWH7 488 aaPredicted RBP15.36■□□□□ 0.05
NPHP4-205ENST00000466897 TTLL3Q9Y4R7 772 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ZDBF2Q9HCK1 2354 aa15.36■□□□□ 0.05
NPHP4-205ENST00000466897 ZNF318Q5VUA4 2279 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 TRAFD1O14545 582 aaPredicted RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 ANXA9O76027 345 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 IFNB1P01574 187 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 IGLV3-19P01714 112 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 TDGF1P13385 188 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 NDUFV2P19404 249 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 ITGB7P26010 798 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 FDFT1P37268 417 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 NRLP54845 237 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 SKOR1P84550 965 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 BCL2L1Q07817 233 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 SFSWAPQ12872 951 aaKnown RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 MPP3Q13368 585 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 ZNF805Q5CZA5 627 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 ARSIQ5FYB1 569 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 BRAT1Q6PJG6 821 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 GDPD4Q6W3E5 623 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 USP30Q70CQ3 517 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 PRPF39Q86UA1 669 aaKnown RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 MMAAQ8IVH4 418 aaKnown RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 C1orf210Q8IVY1 113 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 CEP112Q8N8E3 955 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 OR6K2Q8NGY2 324 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 SIPA1Q96FS4 1042 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 LRFN3Q9BTN0 628 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 TDRD1Q9BXT4 1180 aaKnown RBP15.35■□□□□ 0.05
NPHP4-205ENST00000466897 SUV39H2Q9H5I1 410 aa15.35■□□□□ 0.05
NPHP4-205ENST00000466897 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms