RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IGHV4-34P06331 123 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 PYGMP11217 842 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 MAT2AP31153 395 aaKnown RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 ABL2P42684 1182 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 SEMG2Q02383 582 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 ITKQ08881 620 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 AP1B1Q10567 949 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 ZNF235Q14590 738 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 RFTN1Q14699 578 aaPredicted RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 IFI16Q16666 785 aaKnown RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 ZNF805Q5CZA5 627 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 TFDP3Q5H9I0 405 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 PLA2G2CQ5R387 149 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 MARC1Q5VT66 337 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 LAYNQ6UX15 382 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 CAMK1DQ8IU85 385 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 TXLNBQ8N3L3 684 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 CADM4Q8NFZ8 388 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 EXD1Q8NHP7 514 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 ANP32BQ92688 251 aaKnown RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 FAM131CQ96AQ9 280 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 CALR3Q96L12 384 aaKnown RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 FAM118BQ9BPY3 351 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 CEP41Q9BYV8 373 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 TSGA10Q9BZW7 698 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 C10orf88Q9H8K7 445 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 NT5MQ9NPB1 228 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 SEPT3Q9UH03 358 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 GGT7Q9UJ14 662 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 PPP2R2CQ9Y2T4 447 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.81□□□□□ -0.52
CUX1-207ENST00000465461 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
CUX1-207ENST00000465461 VPS13AQ96RL7 3174 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 RALGAPA1Q6GYQ0 2036 aa11.81□□□□□ -0.52
CUX1-207ENST00000465461 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 CCDC66A2RUB6 948 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 LRRC72A6NJI9 287 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ZNF487B1APH4 448 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 KCNK1O00180 336 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 WNT9AO14904 365 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 MATN3O15232 486 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 KRT86O43790 486 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 GDF9O60383 454 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 RNGTTO60942 597 aaKnown RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 CFIP05156 583 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ADRB3P13945 408 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 TIMP2P16035 220 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 CCNCP24863 283 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ITGB7P26010 798 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 MMP13P45452 471 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 NEK3P51956 506 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 RWDD2BP57060 319 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 IRX4P78413 519 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 RAD51Q06609 339 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SFSWAPQ12872 951 aaKnown RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 ZBTB17Q13105 803 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SPDYCQ5MJ68 293 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 FBXL19Q6PCT2 694 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ZSWIM9Q86XI8 627 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 VSIG1Q86XK7 387 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SYT12Q8IV01 421 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 CCDC13Q8IYE1 715 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SYCE1Q8N0S2 351 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ZCCHC9Q8N567 271 aaKnown RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 OR2T34Q8NGX1 318 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 NSMCE1Q8WV22 266 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 HDAC11Q96DB2 347 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 PPP1R16AQ96I34 528 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 RBM41Q96IZ5 413 aaKnown RBP11.8□□□□□ -0.52
CUX1-207ENST00000465461 PDLIM2Q96JY6 352 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ZNF599Q96NL3 588 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 TSGA13Q96PP4 275 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 PSKH2Q96QS6 385 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 ORAI3Q9BRQ5 295 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 HDAC8Q9BY41 377 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 SUV39H2Q9H5I1 410 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 NOD2Q9HC29 1040 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 RBM22Q9NW64 420 aaKnown RBP eCLIP11.8□□□□□ -0.52
CUX1-207ENST00000465461 SEPT10Q9P0V9 454 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 TTLL3Q9Y4R7 772 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 PCDHGA5Q9Y5G8 931 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 GON4LQ3T8J9 2241 aa11.8□□□□□ -0.52
CUX1-207ENST00000465461 DOCK9Q9BZ29 2069 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 A0A1W2PQU0 124 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 SLC7A4O43246 635 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 SPINT1O43278 529 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 NRDCO43847 1150 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 PCDH8O95206 1070 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 JCHAINP01591 159 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 HLA-DQB2P05538 268 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 ZNF806P0C7X5 589 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 CCNB1P14635 433 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 ZFXP17010 805 aaPredicted RBP11.79□□□□□ -0.52
CUX1-207ENST00000465461 MX2P20592 715 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 DSC2Q02487 901 aa11.79□□□□□ -0.52
CUX1-207ENST00000465461 PPIDQ08752 370 aaKnown RBP11.79□□□□□ -0.52
CUX1-207ENST00000465461 TFDP2Q14188 446 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms