RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 ZNF789Q5FWF6 425 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 ARL13AQ5H913 290 aaPredicted RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 C10orf120Q5SQS8 335 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 RASIP1Q5U651 963 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 MARC1Q5VT66 337 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 NEPROQ6NW34 567 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 ARHGAP18Q8N392 663 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 C2CD4AQ8NCU7 369 aaPredicted RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 GPR78Q96P69 363 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 UBE2OQ9C0C9 1292 aaKnown RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 CRISPLD1Q9H336 500 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 WDR55Q9H6Y2 383 aaPredicted RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 SP110Q9HB58 689 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 TMEM248Q9NWD8 314 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 MID2Q9UJV3 735 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 WASF2Q9Y6W5 498 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 A0A088AWK7 358 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 H2AFYO75367 372 aaKnown RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 CIB2O75838 187 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 PIGNO95427 931 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 CD151P48509 253 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 SNX30Q5VWJ9 437 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 KIAA0930Q6ICG6 404 aaPredicted RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 CNSTQ6PJW8 725 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 NET1Q7Z628 596 aaPredicted RBP20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 RDH11Q8TC12 318 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 NDNQ99608 321 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 DRC3Q9H069 523 aa20.6■□□□□ 0.89
TUBGCP3-204ENST00000464139 TARM1B6A8C7 271 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 NEMP1O14524 444 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SYN3O14994 580 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 DLX3O60479 287 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 AOC2O75106 756 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 ALDH1A1P00352 501 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 ETFBP38117 255 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SLC34A1Q06495 639 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 NAA25Q14CX7 972 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 RBM20Q5T481 1227 aaKnown RBP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MAP3K21Q5TCX8 1036 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 ATP6V0D2Q8N8Y2 350 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 CFAP61Q8NHU2 1237 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SGF29Q96ES7 293 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SEPT5Q99719 369 aaPredicted RBP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MARCH2Q9P0N8 246 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SLC12A8A0AV02 714 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MMP2P08253 660 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 CPB1P15086 417 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 SERPINH1P50454 418 aaKnown RBP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MGAT5BQ3V5L5 792 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 C1orf146Q5VVC0 180 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 RSPO2Q6UXX9 243 aaPredicted RBP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 TMC7Q7Z402 723 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 MYEOVQ96EZ4 313 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 OSBPL1AQ9BXW6 950 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 NMRK1Q9NWW6 199 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 STX18Q9P2W9 335 aaKnown RBP20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 RAP2CQ9Y3L5 183 aa20.59■□□□□ 0.89
TUBGCP3-204ENST00000464139 CCL22O00626 93 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 GJB3O75712 270 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 COL6A2P12110 1019 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 CD1EP15812 388 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 PBX3P40426 434 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 MAGEA11P43364 429 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 PRKD2Q9BZL6 878 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 CYP4F11Q9HBI6 524 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 TCF7L2Q9NQB0 619 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 IL37Q9NZH6 218 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 FNIP2Q9P278 1114 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 ZDHHC2Q9UIJ5 367 aa20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 G3BP2Q9UN86 482 aaKnown RBP20.58■□□□□ 0.89
TUBGCP3-204ENST00000464139 A0A1W2PQ45 241 aaPredicted RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 A0A1W2PQY0 241 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 EIF4E1BA6NMX2 242 aaKnown RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 NT5C1B-RDH14C9J2C7 533 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 MATN2O00339 956 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 VHLP40337 213 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 RPL14P50914 215 aaKnown RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 MRPL58Q14197 206 aaKnown RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 TRIP4Q15650 581 aaPredicted RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 C6orf163Q5TEZ5 329 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 ABI1Q8IZP0 508 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 RPRD1AQ96P16 312 aaPredicted RBP20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 FAM167BQ9BTA0 163 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 ARNT2Q9HBZ2 717 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 TMEM161AQ9NX61 479 aa20.58■□□□□ 0.88
TUBGCP3-204ENST00000464139 HEATR9A2RTY3 570 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 F8W8V4 182 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 SORBS2O94875 1100 aaKnown RBP20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 EPHA3P29320 983 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 CRABP2P29373 138 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 ACTR3P61158 418 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 MUM1Q2TAK8 710 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 TRMT5Q32P41 509 aaKnown RBP20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 TSTD2Q5T7W7 516 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 RNF19BQ6ZMZ0 732 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 FRMD7Q6ZUT3 714 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 LSMEM2Q8N112 164 aa20.57■□□□□ 0.88
TUBGCP3-204ENST00000464139 PGBD5Q8N414 524 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms