RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 ZFR2Q9UPR6 939 aaKnown RBP12.09□□□□□ -0.47
RTCB-202ENST00000463455 FADS3Q9Y5Q0 445 aa12.09□□□□□ -0.47
RTCB-202ENST00000463455 ARID1BQ8NFD5 2236 aaPredicted RBP12.09□□□□□ -0.47
RTCB-202ENST00000463455 FRYQ5TBA9 3013 aa12.08□□□□□ -0.47
RTCB-202ENST00000463455 TMEM191CA6NGB0 347 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 A6NNZ2 444 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 RASA4BC9J798 803 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 ENC1O14682 589 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 SLC31A1O15431 190 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 RASA4O43374 803 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 BUB1O43683 1085 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 CREB3O43889 395 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 RNF8O76064 485 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 TMCC1O94876 653 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 IGSF6O95976 241 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 THEGLP0DJG4 465 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 DNA2P51530 1060 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 TPI1P60174 286 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 SERINC3Q13530 473 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 MYLK3Q32MK0 819 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 ERMARDQ5T6L9 678 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 KYAT3Q6YP21 454 aaKnown RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 KANSL1Q7Z3B3 1105 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 VPS36Q86VN1 386 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 PYROXD2Q8N2H3 581 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 PNPLA1Q8N8W4 532 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 ZCCHC14Q8WYQ9 949 aaKnown RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 NAP1L5Q96NT1 182 aaPredicted RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 SLC17A9Q9BYT1 436 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 CPEB1Q9BZB8 566 aaKnown RBP12.08□□□□□ -0.48
RTCB-202ENST00000463455 TM6SF2Q9BZW4 377 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 ISCUQ9H1K1 167 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 GPR27Q9NS67 375 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 DKK4Q9UBT3 224 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 AP4E1Q9UPM8 1137 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 PTPRBP23467 1997 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 FAM208BQ5VWN6 2430 aa12.08□□□□□ -0.48
RTCB-202ENST00000463455 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 AKAP13Q12802 2813 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 C16orf96A6NNT2 1141 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 DDX3XO00571 662 aaKnown RBP eCLIP12.07□□□□□ -0.481e-9■■■■■ 47.8
RTCB-202ENST00000463455 TOR1BO14657 336 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 PRPSAP2O60256 369 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 LDOC1O95751 146 aaPredicted RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 FTLP02792 175 aaPredicted RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 PCK1P35558 622 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 PBX1P40424 430 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 RABIFP47224 123 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 HCAR3P49019 387 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 IL9RQ01113 521 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 OGDHQ02218 1023 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 ACACAQ13085 2346 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 E4F1Q66K89 784 aaPredicted RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 GATAD2AQ86YP4 633 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 TSC1Q92574 1164 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 HMCESQ96FZ2 354 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 CNDP2Q96KP4 475 aaKnown RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 C1QTNF7Q9BXJ2 289 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 MAGEB5Q9BZ81 275 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 LRRC19Q9H756 370 aa12.07□□□□□ -0.48
RTCB-202ENST00000463455 CNOT8Q9UFF9 292 aaKnown RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 ANKRD11Q6UB99 2663 aaPredicted RBP12.07□□□□□ -0.48
RTCB-202ENST00000463455 PKD1L2Q7Z442 2459 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 SYCE3A1L190 88 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 RNF103O00237 685 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 EEF2KO00418 725 aaKnown RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 KRIT1O00522 736 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 AREL1O15033 823 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 RFPL3O75679 317 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 CAPNS1P04632 268 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 UGT2B4P06133 528 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 PRLRP16471 622 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 CSNK1DP48730 415 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 RHOAP61586 193 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 FANCCQ00597 558 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 SGCGQ13326 291 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 ZNF211Q13398 564 aaPredicted RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 RFTN1Q14699 578 aaPredicted RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 HS1BP3Q53T59 392 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 SEL1L3Q68CR1 1132 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 GDPD4Q6W3E5 623 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 GCNT7Q6ZNI0 430 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 RFX8Q6ZV50 586 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 ZNF354CQ86Y25 554 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 DNAAF5Q86Y56 855 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 CACTIN-AS1Q8N1I8 211 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 RYBPQ8N488 228 aaPredicted RBP12.06□□□□□ -0.48
RTCB-202ENST00000463455 LZTR1Q8N653 840 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 VOPP1Q96AW1 172 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 ZNF653Q96CK0 615 aa12.06□□□□□ -0.48
RTCB-202ENST00000463455 TUBGCP5Q96RT8 1024 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms