RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LMX1AQ8TE12 382 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 ARHGEF26Q96DR7 871 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 VCPIP1Q96JH7 1222 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 SLC46A1Q96NT5 459 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 TM6SF2Q9BZW4 377 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 CPNE5Q9HCH3 593 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 SPASTQ9UBP0 616 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 OR12D3Q9UGF7 316 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 SATB2Q9UPW6 733 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 ACTL7AQ9Y615 435 aa20.1■□□□□ 0.81
VARS-221ENST00000463184 TCEA3O75764 348 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 GSRP00390 522 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 ACVRL1P37023 503 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 ABL2P42684 1182 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 MAPKAPK2P49137 400 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 SNRPD1P62314 119 aaKnown RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 POLD3Q15054 466 aaPredicted RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 DEFB133Q30KQ1 61 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 ARL13BQ3SXY8 428 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 C3orf38Q5JPI3 329 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 TPRG1LQ5T0D9 272 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 KLHDC7AQ5VTJ3 777 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 RBM44Q6ZP01 1051 aaKnown RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 SNRNP27Q8WVK2 155 aaKnown RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 ARHGEF2Q92974 986 aaKnown RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 GLMNQ92990 594 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 CENPTQ96BT3 561 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 CCDC97Q96F63 343 aaPredicted RBP20.09■□□□□ 0.81
VARS-221ENST00000463184 TUBGCP2Q9BSJ2 902 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 BOCQ9BWV1 1114 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 OSBPL1AQ9BXW6 950 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 HPCAL4Q9UM19 191 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 PCDHGA8Q9Y5G5 932 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 ENTPD2Q9Y5L3 495 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 FHOD1Q9Y613 1164 aa20.09■□□□□ 0.81
VARS-221ENST00000463184 ATMQ13315 3056 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 POP4O95707 220 aaKnown RBP20.08■□□□□ 0.81
VARS-221ENST00000463184 GKP32189 559 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 ADRA1BP35368 520 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 RPIAP49247 311 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 ATP11AP98196 1134 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 MYL5Q02045 173 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 MIIPQ5JXC2 388 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 NLRP14Q86W24 1093 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 OR2AP1Q8NGE2 309 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 WDR48Q8TAF3 677 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 CPA5Q8WXQ8 436 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 ATXN7L3BQ96GX2 97 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 TBATAQ96M53 351 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 BPIFA3Q9BQP9 254 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 MAGEH1Q9H213 219 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 GGT7Q9UJ14 662 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 SSUH2Q9Y2M2 353 aa20.08■□□□□ 0.81
VARS-221ENST00000463184 FAM170AA1A519 330 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 KRIT1O00522 736 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 TOR1BO14657 336 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 RHOQP17081 205 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 THOP1P52888 689 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 YPEL5P62699 121 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 NOMO3P69849 1222 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 VAC14Q08AM6 782 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 MYLK3Q32MK0 819 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 MANEALQ5VSG8 457 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 RWDD4Q6NW29 188 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 NOP9Q86U38 636 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 OR6K2Q8NGY2 324 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 NAT6Q93015 286 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 NAA15Q9BXJ9 866 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 METTL5Q9NRN9 209 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 SAMSN1Q9NSI8 373 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 NDFIP2Q9NV92 336 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 TMEM248Q9NWD8 314 aa20.07■□□□□ 0.8
VARS-221ENST00000463184 APOBEC3BQ9UH17 382 aaKnown RBP20.07■□□□□ 0.8
VARS-221ENST00000463184 A0A1W2PNU3 283 aaPredicted RBP20.06■□□□□ 0.8
VARS-221ENST00000463184 LMO7DNF2Z398 122 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 AREL1O15033 823 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 MUSKO15146 869 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 GCATO75600 419 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 UGT2B4P06133 528 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 MMEP08473 750 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 UCHL3P15374 230 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 ADKP55263 362 aaKnown RBP20.06■□□□□ 0.8
VARS-221ENST00000463184 SKOR1P84550 965 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 PRRT3Q5FWE3 981 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 C6orf132Q5T0Z8 1188 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 NAA35Q5VZE5 725 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 TTC7BQ86TV6 843 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 PHACTR4Q8IZ21 702 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 RBFAQ8N0V3 343 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 ARL14Q8N4G2 192 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 EMC1Q8N766 993 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 PRR11Q96HE9 360 aaPredicted RBP20.06■□□□□ 0.8
VARS-221ENST00000463184 KLHL32Q96NJ5 620 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 C1QTNF7Q9BXJ2 289 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 STK33Q9BYT3 514 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 SLC13A1Q9BZW2 595 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 DNAI1Q9UI46 699 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 ITM2BQ9Y287 266 aa20.06■□□□□ 0.8
VARS-221ENST00000463184 RAMP2O60895 175 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms