RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 SP9P0CG40 484 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 SLC8A1P32418 973 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 DRICH1Q6PGQ1 229 aaPredicted RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 DSG4Q86SJ6 1040 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 PGBD3Q8N328 593 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 FRMD1Q8N878 549 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 FAM71DQ8N9W8 422 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 ARRDC3Q96B67 414 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 CPEB1Q9BZB8 566 aaKnown RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 PABPC3Q9H361 631 aaKnown RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 AXIN1O15169 862 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 RNASEH1O60930 286 aaKnown RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 UGT2B4P06133 528 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 TPMTP51580 245 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 AP1S1P61966 158 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 CYP1B1Q16678 543 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 KCTD19Q17RG1 926 aaPredicted RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 TTC27Q6P3X3 843 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 CAMK1DQ8IU85 385 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 RLN3Q8WXF3 142 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 NAP1L3Q99457 506 aaPredicted RBP19.44■□□□□ 0.7
XPA-202ENST00000462523 SCUBE2Q9NQ36 999 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 ITM2CQ9NQX7 267 aa19.44■□□□□ 0.7
XPA-202ENST00000462523 CCDC163A0A0D9SF12 145 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 KPNA3O00505 521 aaPredicted RBP19.43■□□□□ 0.7
XPA-202ENST00000462523 TRAFD1O14545 582 aaPredicted RBP19.43■□□□□ 0.7
XPA-202ENST00000462523 ADH1BP00325 375 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 DNTTP04053 509 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 ITGAVP06756 1048 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 C5AR1P21730 350 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 KCNJ1P48048 391 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 ZBTB16Q05516 673 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 ITKQ08881 620 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 MAP7D1Q3KQU3 841 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 ZNF528Q3MIS6 628 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 PRPF39Q86UA1 669 aaKnown RBP19.43■□□□□ 0.7
XPA-202ENST00000462523 WDR5BQ86VZ2 330 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 ZSWIM9Q86XI8 627 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 C12orf50Q8NA57 414 aaPredicted RBP19.43■□□□□ 0.7
XPA-202ENST00000462523 GLIS1Q8NBF1 620 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 PRSS33Q8NF86 280 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 CCDC110Q8TBZ0 833 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 FAM131CQ96AQ9 280 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 RTP4Q96DX8 246 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 LRIG1Q96JA1 1093 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 KLHL32Q96NJ5 620 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 VAT1Q99536 393 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 GORASP1Q9BQQ3 440 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 GLOD4Q9HC38 313 aa19.43■□□□□ 0.7
XPA-202ENST00000462523 A0A1W2PP55 124 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 C1QTNF3-AMACRE9PGA6 284 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 NEBLO76041 1014 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 IGLV3-19P01714 112 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 NFKB1P19838 968 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 TCF15Q12870 199 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 TRAF2Q12933 501 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 ANKRD20A2Q5SQ80 823 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 ANKRD20A1Q5TYW2 823 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 ANKRD20A3Q5VUR7 823 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 GDPD4Q6W3E5 623 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 PRUNE1Q86TP1 453 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 LONP2Q86WA8 852 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 FAM160A2Q8N612 972 aaPredicted RBP19.42■□□□□ 0.7
XPA-202ENST00000462523 TADA1Q96BN2 335 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 IMP4Q96G21 291 aaKnown RBP19.42■□□□□ 0.7
XPA-202ENST00000462523 SPATA13Q96N96 652 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 TUBGCP5Q96RT8 1024 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 OSBPL1AQ9BXW6 950 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 KLHL8Q9P2G9 620 aaPredicted RBP19.42■□□□□ 0.7
XPA-202ENST00000462523 ZNF148Q9UQR1 794 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 INVSQ9Y283 1065 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 PCDHGC4Q9Y5F7 938 aa19.42■□□□□ 0.7
XPA-202ENST00000462523 FANCMQ8IYD8 2048 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 NUMA1Q14980 2115 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 C5orf60A6NFR6 353 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 F5H423 210 aaPredicted RBP19.41■□□□□ 0.7
XPA-202ENST00000462523 ITGB7P26010 798 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 P2RY2P41231 377 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 CD86P42081 329 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 SKOR1P84550 965 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 RAD51Q06609 339 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 CNTN1Q12860 1018 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 SRSF5Q13243 272 aaKnown RBP19.41■□□□□ 0.7
XPA-202ENST00000462523 ZNF805Q5CZA5 627 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 RALGPS1Q5JS13 557 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 PIP5KL1Q5T9C9 394 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 AGBL4Q5VU57 503 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 FAM46CQ5VWP2 391 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 PARS2Q7L3T8 475 aaKnown RBP19.41■□□□□ 0.7
XPA-202ENST00000462523 PID1Q7Z2X4 250 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 SPATA22Q8NHS9 363 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 ZNF592Q92610 1267 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 ECHDC3Q96DC8 303 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 RBM15Q96T37 977 aaKnown RBP eCLIP19.41■□□□□ 0.7
XPA-202ENST00000462523 SLC25A51Q9H1U9 297 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 SUV39H2Q9H5I1 410 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 ATP13A3Q9H7F0 1226 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 FBXL12Q9NXK8 326 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 TRHDEQ9UKU6 1024 aa19.41■□□□□ 0.7
XPA-202ENST00000462523 SCML1Q9UN30 329 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms