RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MRGPRX2Q96LB1 330 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 SERPINI1Q99574 410 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 PKMYT1Q99640 499 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 POMKQ9H5K3 350 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 GTSE1Q9NYZ3 720 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 SCN4AP35499 1836 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 NEMP2A6NFY4 417 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 E9PAM4 449 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 SLCO1B7G3V0H7 640 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 H3BNX3 289 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 CYP11A1P05108 521 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 OR4Q2P0C623 313 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 HK2P52789 917 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 PKNOX1P55347 436 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 ITKQ08881 620 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 CSHL1Q14406 222 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 FOXB2Q5VYV0 432 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 TIGD7Q6NT04 549 aaPredicted RBP17.12■□□□□ 0.33
ACTB-207ENST00000462494 CNSTQ6PJW8 725 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 RNF148Q8N7C7 305 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 C2CD4AQ8NCU7 369 aaPredicted RBP17.12■□□□□ 0.33
ACTB-207ENST00000462494 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 GBP5Q96PP8 586 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
ACTB-207ENST00000462494 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 FBXO5Q9UKT4 447 aa17.12■□□□□ 0.33
ACTB-207ENST00000462494 TXNDC9O14530 226 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 HNRNPLP14866 589 aaKnown RBP eCLIP17.11■□□□□ 0.33
ACTB-207ENST00000462494 THOP1P52888 689 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 ATXN3P54252 364 aaPredicted RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 CACNB2Q08289 660 aaPredicted RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 HNRNPDQ14103 355 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 EML3Q32P44 896 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 RBM20Q5T481 1227 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 MANEALQ5VSG8 457 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 NEPROQ6NW34 567 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 CD300LGQ6UXG3 332 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 BNC2Q6ZN30 1099 aaPredicted RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 MRPL10Q7Z7H8 261 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 SCML4Q8N228 414 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 PNPLA1Q8N8W4 532 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 SMOC2Q9H3U7 446 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 SUDS3Q9H7L9 328 aaPredicted RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 CYP4F12Q9HCS2 524 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 NCKIPSDQ9NZQ3 722 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 IPO11Q9UI26 975 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 DSEQ9UL01 958 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 PRPF19Q9UMS4 504 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 HS3ST4Q9Y661 456 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 MYLKQ15746 1914 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 HOXC13P31276 330 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 POLD2P49005 469 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 WNT3AP56704 352 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 NSUN2Q08J23 767 aaKnown RBP eCLIP17.11■□□□□ 0.33
ACTB-207ENST00000462494 MED21Q13503 144 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 ART3Q13508 389 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 MAPRE1Q15691 268 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 ZNF789Q5FWF6 425 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 TFAP2DQ7Z6R9 452 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 SCD5Q86SK9 330 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 CPSF7Q8N684 471 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 TRPV1Q8NER1 839 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 PTCD2Q8WV60 388 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
ACTB-207ENST00000462494 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 TREX1Q9NSU2 369 aa17.11■□□□□ 0.33
ACTB-207ENST00000462494 TTC3P53804 2025 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 A0A087X1B8 175 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
ACTB-207ENST00000462494 DUSP11O75319 330 aaKnown RBP17.1■□□□□ 0.33
ACTB-207ENST00000462494 UQCRBP14927 111 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 CPB1P15086 417 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 MAXP61244 160 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 FLOT2Q14254 428 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 THEMIS2Q5TEJ8 643 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 SDHAF4Q5VUM1 108 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 RANBP10Q6VN20 620 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 TRIM67Q6ZTA4 783 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 SETD3Q86TU7 594 aaPredicted RBP17.1■□□□□ 0.33
ACTB-207ENST00000462494 ZNF354CQ86Y25 554 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 RTL3Q8N8U3 475 aaKnown RBP17.1■□□□□ 0.33
ACTB-207ENST00000462494 KDM1BQ8NB78 822 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 ADAM2Q99965 735 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 CCDC28BQ9BUN5 200 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 NT5MQ9NPB1 228 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 ZDHHC7Q9NXF8 308 aa17.1■□□□□ 0.33
ACTB-207ENST00000462494 COPG1Q9Y678 874 aaKnown RBP17.1■□□□□ 0.33
ACTB-207ENST00000462494 STX16-NPEPL1H3BU86 382 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 M0QZQ0 153 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 XRCC1P18887 633 aaPredicted RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 MRPS22P82650 360 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 TUSC3Q13454 348 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 MMEL1Q495T6 779 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 KIAA0930Q6ICG6 404 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms