RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 NR0B2Q15466 257 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 CDKN3Q16667 212 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 CCDC14Q49A88 953 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 GDPD4Q6W3E5 623 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 EFL1Q7Z2Z2 1120 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 SPACA3Q8IXA5 215 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 ANKRD20A12PQ8NF67 263 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 FAM172AQ8WUF8 416 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 SLC20A1Q8WUM9 679 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 CASKIN2Q8WXE0 1202 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 NAF1Q96HR8 494 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 KLHL32Q96NJ5 620 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 SELENOOQ9BVL4 669 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 SLC13A1Q9BZW2 595 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 VPS16Q9H269 839 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 GPR27Q9NS67 375 aa15.62■□□□□ 0.09
SKA3-204ENST00000462482 FAM207AQ9NSI2 230 aaPredicted RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 APOBEC3BQ9UH17 382 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 NOCTQ9UK39 431 aaKnown RBP15.62■□□□□ 0.09
SKA3-204ENST00000462482 CAPN8A6NHC0 703 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 C2CD4BA6NLJ0 364 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 TOR1BO14657 336 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 TPP1O14773 563 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 KDELR3O43731 214 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 TM7SF2O76062 418 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 LRIG2O94898 1065 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 CALB1P05937 261 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 ANXA6P08133 673 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 GKP32189 559 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 ABL2P42684 1182 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 RHOAP61586 193 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 YPEL5P62699 121 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 DEFB133Q30KQ1 61 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 EFHC2Q5JST6 749 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 MANEALQ5VSG8 457 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 LEKR1Q6ZMV7 388 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 VPS36Q86VN1 386 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 NLRP14Q86W24 1093 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 SLC30A5Q8TAD4 765 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 WDR48Q8TAF3 677 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 GPT2Q8TD30 523 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 KCNE4Q8WWG9 221 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 SCG3Q8WXD2 468 aaKnown RBP15.61■□□□□ 0.09
SKA3-204ENST00000462482 NAT6Q93015 286 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 NTAN1Q96AB6 310 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 KLF6Q99612 283 aaPredicted RBP15.61■□□□□ 0.09
SKA3-204ENST00000462482 NCAPGQ9BPX3 1015 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 NLRC4Q9NPP4 1024 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 SEPT11Q9NVA2 429 aaKnown RBP15.61■□□□□ 0.09
SKA3-204ENST00000462482 ADAM22Q9P0K1 906 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 DOLKQ9UPQ8 538 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 ITM2BQ9Y287 266 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 ACTL7AQ9Y615 435 aa15.61■□□□□ 0.09
SKA3-204ENST00000462482 DXOO77932 396 aaKnown RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 CD160O95971 181 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 GPD1P21695 349 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 EPHB2P29323 1055 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 BLKP51451 505 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 TMPRSS3P57727 454 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 PFN3P60673 137 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 FMO1Q01740 532 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 ISXQ2M1V0 245 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 PRRT3Q5FWE3 981 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 CFAP58Q5T655 872 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 ATXN7L2Q5T6C5 722 aaPredicted RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 FAXCQ5TGI0 409 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 ESRP1Q6NXG1 681 aaKnown RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 SCYL2Q6P3W7 929 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 RBM44Q6ZP01 1051 aaKnown RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 SLFN11Q7Z7L1 901 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 PHACTR4Q8IZ21 702 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 JOSD2Q8TAC2 188 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 ENOX1Q8TC92 643 aaKnown RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 EPAS1Q99814 870 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 TTYH3Q9C0H2 523 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 GANQ9H2C0 597 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 NDFIP2Q9NV92 336 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 DONSONQ9NYP3 566 aa15.6■□□□□ 0.09
SKA3-204ENST00000462482 FASNP49327 2511 aaKnown RBP15.6■□□□□ 0.09
SKA3-204ENST00000462482 NBEAQ8NFP9 2946 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 IGSF10Q6WRI0 2623 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 LY6G6EA0A0G2JKS1 128 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 EME2A4GXA9 379 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 FAM72CH0Y354 149 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 MUSKO15146 869 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 MMP20O60882 483 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 TMCC1O94876 653 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 SUOXP51687 545 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 ADKP55263 362 aaKnown RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 YBEYP58557 167 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 ELP6Q0PNE2 266 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 TAF1BQ53T94 588 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 INO80DQ53TQ3 878 aaPredicted RBP15.59■□□□□ 0.09
SKA3-204ENST00000462482 ARTNQ5T4W7 220 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 FAM72AQ5TYM5 149 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 FAM72DQ6L9T8 149 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 DNAJC24Q6P3W2 148 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 GUSBP11Q6P575 273 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 FAM72BQ86X60 149 aa15.59■□□□□ 0.09
SKA3-204ENST00000462482 CCDC185Q8N715 623 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms