RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 Q6ZSR6 202 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 PROSER1Q86XN7 944 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 DCP2Q8IU60 420 aaKnown RBP19.22■□□□□ 0.67
VARS-220ENST00000461874 SLC22A18ASQ8N1D0 253 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 SLC25A45Q8N413 288 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 NETO2Q8NC67 525 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 FNIP1Q8TF40 1166 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 KLHL32Q96NJ5 620 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 TRIM7Q9C029 511 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 LRRC19Q9H756 370 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 DONSONQ9NYP3 566 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 AP4E1Q9UPM8 1137 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 MFHAS1Q9Y4C4 1052 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 PTPRBP23467 1997 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 APC2O95996 2303 aa19.22■□□□□ 0.67
VARS-220ENST00000461874 FAM149AA5PLN7 773 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 POM121BA6NF01 834 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 IGLON5A6NGN9 336 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 A6NNZ2 444 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 EIF3CLB5ME19 914 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 NEMP1O14524 444 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 AREL1O15033 823 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 SPINT1O43278 529 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 RFPL3O75679 317 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 IGSF6O95976 241 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 SKILP12757 684 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 DGKAP23743 735 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 RHOAP61586 193 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 SGCGQ13326 291 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 CA9Q16790 459 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 KLHL40Q2TBA0 621 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 FIGNQ5HY92 759 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 ERMARDQ5T6L9 678 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 KYAT3Q6YP21 454 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 TMPRSS12Q86WS5 348 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 ASB12Q8WXK4 309 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 ARHGEF26Q96DR7 871 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 IFT43Q96FT9 208 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 LENG8Q96PV6 779 aaPredicted RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 PEBP4Q96S96 227 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 KLF6Q99612 283 aaPredicted RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 EIF3CQ99613 913 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 DHX35Q9H5Z1 703 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 CCDC86Q9H6F5 360 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 CBX8Q9HC52 389 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 GPR27Q9NS67 375 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 CNOT8Q9UFF9 292 aaKnown RBP19.21■□□□□ 0.67
VARS-220ENST00000461874 PCSK1NQ9UHG2 260 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 GGT7Q9UJ14 662 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 ITM2BQ9Y287 266 aa19.21■□□□□ 0.67
VARS-220ENST00000461874 ACACAQ13085 2346 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 SYCE3A1L190 88 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 EEF2KO00418 725 aaKnown RBP19.2■□□□□ 0.66
VARS-220ENST00000461874 TRIM38O00635 465 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 CKMT2P17540 419 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 MIPP30301 263 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 NDST2P52849 883 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 ZNF211Q13398 564 aaPredicted RBP19.2■□□□□ 0.66
VARS-220ENST00000461874 CAMK2BQ13554 666 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 CYTH1Q15438 398 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 PROX2Q3B8N5 592 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 PTAR1Q7Z6K3 402 aaPredicted RBP19.2■□□□□ 0.66
VARS-220ENST00000461874 TTC7BQ86TV6 843 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 SNRNP25Q9BV90 132 aaKnown RBP19.2■□□□□ 0.66
VARS-220ENST00000461874 UCKL1Q9NWZ5 548 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 DKK3Q9UBP4 350 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 LHX3Q9UBR4 397 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 UBA2Q9UBT2 640 aaPredicted RBP19.2■□□□□ 0.66
VARS-220ENST00000461874 FAM208BQ5VWN6 2430 aa19.2■□□□□ 0.66
VARS-220ENST00000461874 INSIG1O15503 277 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 SIGLEC6O43699 453 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 PRPSAP2O60256 369 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 RNF8O76064 485 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 MYBL1P10243 752 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 FANCCQ00597 558 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 ILKQ13418 452 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 CYP4V2Q6ZWL3 525 aaPredicted RBP19.19■□□□□ 0.66
VARS-220ENST00000461874 LUZP1Q86V48 1076 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 PSTKQ8IV42 348 aaKnown RBP19.19■□□□□ 0.66
VARS-220ENST00000461874 MDM1Q8TC05 714 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 ZNF653Q96CK0 615 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 TRIM11Q96F44 468 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 CELF6Q96J87 481 aaKnown RBP19.19■□□□□ 0.66
VARS-220ENST00000461874 KCTD15Q96SI1 283 aaPredicted RBP19.19■□□□□ 0.66
VARS-220ENST00000461874 CPEB1Q9BZB8 566 aaKnown RBP19.19■□□□□ 0.66
VARS-220ENST00000461874 ISCUQ9H1K1 167 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 PDFQ9HBH1 243 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 SCINQ9Y6U3 715 aa19.19■□□□□ 0.66
VARS-220ENST00000461874 ZFYVE26Q68DK2 2539 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 TRABD2BA6NFA1 517 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 J3KR12 359 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 FPGTO14772 594 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 PRAMEF11O60813 436 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 PIAS2O75928 621 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 TIMP2P16035 220 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 PBX1P40424 430 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 RABIFP47224 123 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 TPM4P67936 248 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 FZD2Q14332 565 aa19.18■□□□□ 0.66
VARS-220ENST00000461874 AFMIDQ63HM1 303 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms