RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ZNF788Q6ZQV5 615 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 KDELC2Q7Z4H8 507 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SERPINA11Q86U17 422 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 TICAM2Q86XR7 235 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 TICAM1Q8IUC6 712 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 ARHGAP12Q8IWW6 846 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 HACE1Q8IYU2 909 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SLC25A41Q8N5S1 370 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM217Q8N7C4 229 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 FAM98AQ8NCA5 519 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 GDPD5Q8WTR4 605 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 IP6K1Q92551 441 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 USP6NLQ92738 828 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 FAM120BQ96EK7 910 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 FEM1CQ96JP0 617 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SH2D3AQ9BRG2 576 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 MAK16Q9BXY0 300 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 ITPAQ9BY32 194 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 FBRSL1Q9HCM7 1045 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 PNRC2Q9NPJ4 139 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 ASAH2Q9NR71 780 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SPATS2LQ9NUQ6 558 aaKnown RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 DLGAP2Q9P1A6 1054 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SEL1LQ9UBV2 794 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF70Q9UC06 446 aaPredicted RBP3.21□□□□□ -1.9
HDAC6-212ENST00000461608 SLCO3A1Q9UIG8 710 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 LAMP3Q9UQV4 416 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 TMEM5Q9Y2B1 443 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 PSAT1Q9Y617 370 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 COX11Q9Y6N1 276 aa3.21□□□□□ -1.9
HDAC6-212ENST00000461608 UTYO14607 1347 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TRBV5-7A0A0A0MS05 114 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 SYNDIG1LA6NDD5 238 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 LIPT2A6NK58 231 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 B4DLN1 442 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 SCAMP1O15126 338 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TMCC2O75069 709 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CNOT3O75175 753 aaKnown RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 NDUFS3O75489 264 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TFP02787 698 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CTPS1P17812 591 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 HOXD13P35453 343 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PPARGP37231 505 aaPredicted RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 HDAC4P56524 1084 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TFAP4Q01664 338 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 MC1RQ01726 317 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CALD1Q05682 793 aaKnown RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 NIPAL4Q0D2K0 466 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 OLIG2Q13516 323 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 RUNX2Q13950 521 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 KRT24Q2M2I5 525 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 DCAF6Q58WW2 860 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 RILPL1Q5EBL4 403 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PLEKHS1Q5SXH7 462 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CPLX2Q6PUV4 134 aaKnown RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF793Q6ZN11 406 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 RD3Q7Z3Z2 195 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TBC1D26Q86UD7 250 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CAMK1DQ8IU85 385 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 ADGRF2Q8IZF7 708 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 SLC44A5Q8NCS7 719 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 C1orf131Q8NDD1 294 aaKnown RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 OR4N2Q8NGD1 307 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PIGOQ8TEQ8 1089 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 KAT2AQ92830 837 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 RNF183Q96D59 192 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PGAM5Q96HS1 289 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 NCAPGQ9BPX3 1015 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 USP44Q9H0E7 712 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 GHITMQ9H3K2 345 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CXorf56Q9H5V9 222 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 MLXIPLQ9NP71 852 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 CLIC5Q9NZA1 410 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 KLHL13Q9P2N7 655 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 TBC1D29Q9UFV1 150 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 POLG2Q9UHN1 485 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 HAO1Q9UJM8 370 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 MTMR6Q9Y217 621 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 AAR2Q9Y312 384 aaKnown RBP3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PIAS3Q9Y6X2 628 aa3.2□□□□□ -1.9
HDAC6-212ENST00000461608 PASKQ96RG2 1323 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 DYTNA2CJ06 578 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 A8MZ25 164 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 MYO1GB0I1T2 1018 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 PPP6CO00743 305 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 VILLO15195 856 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 DOK2O60496 412 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 BCAR3O75815 825 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 MT-CYBP00156 380 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 KLKB1P03952 638 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 NHLRC4P0CG21 123 aaPredicted RBP3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CSH1P0DML2 217 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CSH2P0DML3 217 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CTSAP10619 480 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CD58P19256 250 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 CHATP28329 748 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 EPHB2P29323 1055 aa3.19□□□□□ -1.9
HDAC6-212ENST00000461608 TTKP33981 857 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms