RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	SCN8A	Q9UQD0	1980 aa		13.98	□□□□□ -0.17
PABPC4-208	ENST00000461578		A0A1W2PQ27	194 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578		A0A1W2PQ64	194 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578		A0A1W2PQM1	296 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	C16orf96	A6NNT2	1141 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	P4HA2	O15460	535 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	TSPAN6	O43657	245 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	SRGAP2	O75044	1071 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	DAB1	O75553	588 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	SFTPC	P11686	197 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	EIF4A3	P38919	411 aa	Known RBP	13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	RNASE9	P60153	205 aa	Known RBP	13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	PPARD	Q03181	441 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	MTA1	Q13330	715 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	CLCA4	Q14CN2	919 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	ISM2	Q6H9L7	571 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	RETSAT	Q6NUM9	610 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	OLFML1	Q6UWY5	402 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	LRRC31	Q6UY01	552 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	PTRH1	Q86Y79	214 aa	Known RBP	13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	ZSCAN1	Q8NBB4	408 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	HTR3C	Q8WXA8	447 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	SNX21	Q969T3	373 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	CENPT	Q96BT3	561 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	CCDC34	Q96HJ3	373 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	CEP63	Q96MT8	703 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	CEP44	Q9C0F1	390 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	ARHGEF38	Q9NXL2	777 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	HECA	Q9UBI9	543 aa	Predicted RBP	13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	ACSL6	Q9UKU0	697 aa		13.97	□□□□□ -0.17
PABPC4-208	ENST00000461578	FAM170A	A1A519	330 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	TMX2-CTNND1	H3BSU7	103 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	ZMPSTE24	O75844	475 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	ERBB2	P04626	1255 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	CTSE	P14091	401 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	ETV5	P41161	510 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SULT1E1	P49888	294 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	MAPK10	P53779	464 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	ARF5	P84085	180 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	KLHL10	Q6JEL2	608 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	GJB7	Q6PEY0	223 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	MACC1	Q6ZN28	852 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	RD3	Q7Z3Z2	195 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	ZSCAN30	Q86W11	494 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	HID1	Q8IV36	788 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578		Q8N9G6	341 aa	Predicted RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	C1orf131	Q8NDD1	294 aa	Known RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SCG3	Q8WXD2	468 aa	Known RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	JPH3	Q8WXH2	748 aa	Predicted RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	TSACC	Q96A04	125 aa	Predicted RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	TBATA	Q96M53	351 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	TMEM74	Q96NL1	305 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	GSDMA	Q96QA5	445 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SEMA3C	Q99985	751 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SRRT	Q9BXP5	876 aa	Known RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SLC25A18	Q9H1K4	315 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	LRRN3	Q9H3W5	708 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	GDPD2	Q9HCC8	539 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	MBNL1	Q9NR56	388 aa	Known RBP	13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	FOXJ2	Q9P0K8	574 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	SEPT3	Q9UH03	358 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	GPR34	Q9UPC5	381 aa		13.96	□□□□□ -0.17
PABPC4-208	ENST00000461578	TLN1	Q9Y490	2541 aa	Known RBP	13.96	□□□□□ -0.18
PABPC4-208	ENST00000461578	BSN	Q9UPA5	3926 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ILVBL	A1L0T0	632 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	DRGX	A6NNA5	263 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	KRIT1	O00522	736 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	PSMA7	O14818	248 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	NVL	O15381	856 aa	Known RBP	13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	MMP20	O60882	483 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	NTRK1	P04629	796 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	UGT2B4	P06133	528 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	CCKBR	P32239	447 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	CXCR3	P49682	368 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	SLC6A3	Q01959	620 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	DEUP1	Q05D60	604 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	UBAP2L	Q14157	1087 aa	Known RBP	13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ELOC	Q15369	112 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ARHGAP44	Q17R89	818 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	SKIDA1	Q1XH10	827 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ZNF805	Q5CZA5	627 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	BRMS1L	Q5PSV4	323 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	NYAP1	Q6ZVC0	841 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	DRC7	Q8IY82	874 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	FSTL5	Q8N475	847 aa	Predicted RBP	13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ASB12	Q8WXK4	309 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	USP7	Q93009	1102 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	SMARCE1	Q969G3	411 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	RAB7B	Q96AH8	199 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	KLHL32	Q96NJ5	620 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	NPY6R	Q99463	290 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	EPAS1	Q99814	870 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	SYNC	Q9H7C4	482 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	PCDHB11	Q9Y5F2	797 aa		13.95	□□□□□ -0.18
PABPC4-208	ENST00000461578	ZFC3H1	O60293	1989 aa	Known RBP	13.94	□□□□□ -0.18
PABPC4-208	ENST00000461578	DOCK4	Q8N1I0	1966 aa		13.94	□□□□□ -0.18
PABPC4-208	ENST00000461578	BECN2	A8MW95	431 aa		13.94	□□□□□ -0.18
PABPC4-208	ENST00000461578	TM7SF2	O76062	418 aa		13.94	□□□□□ -0.18
PABPC4-208	ENST00000461578	SMC2	O95347	1197 aa		13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms