RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 FAF2Q96CS3 445 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 ZNF830Q96NB3 372 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 KLHL32Q96NJ5 620 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 RNF157Q96PX1 679 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 GTPBP2Q9BX10 602 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 GOLPH3Q9H4A6 298 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 CAPN10Q9HC96 672 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 TM9SF3Q9HD45 589 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 FSCN3Q9NQT6 498 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 RXFP3Q9NSD7 469 aa10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
TRAPPC12-213ENST00000461577 ANKRD36A6QL64 1941 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 A0A1W2PQU0 124 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 C16orf96A6NNT2 1141 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 NEMP1O14524 444 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 ARHGAP33O14559 1287 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 APOL1O14791 398 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 PJA2O43164 708 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 MAFKO60675 156 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 NEBLO76041 1014 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 MAP3K6O95382 1288 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 PIGNO95427 931 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 ZFXP17010 805 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 MX2P20592 715 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 XPAP23025 273 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 NUDT1P36639 197 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 HSPA9P38646 679 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 GARSP41250 739 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 CSNK1DP48730 415 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 AFF3P51826 1226 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 TAS2R38P59533 333 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 PPP2CBP62714 309 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 PPP2CAP67775 309 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 NSUN2Q08J23 767 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 GALNT2Q10471 571 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 KIF5AQ12840 1032 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 IFI16Q16666 785 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 UAP1L1Q3KQV9 507 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 SETMARQ53H47 684 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 MARC1Q5VT66 337 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 NEK5Q6P3R8 708 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 TTC7BQ86TV6 843 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 TRIM69Q86WT6 500 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 VSIG1Q86XK7 387 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 PQLC3Q8N755 202 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 RAB7BQ96AH8 199 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 SKA1Q96BD8 255 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 RMDN1Q96DB5 314 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 FEM1CQ96JP0 617 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 SERAC1Q96JX3 654 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 TUBGCP5Q96RT8 1024 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 RTKNQ9BST9 563 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 DESI2Q9BSY9 194 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 CPEB1Q9BZB8 566 aaKnown RBP10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 ZDHHC5Q9C0B5 715 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 LACRTQ9GZZ8 138 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 SUV39H2Q9H5I1 410 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 ATP13A3Q9H7F0 1226 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 GRPEL1Q9HAV7 217 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 AASDHPPTQ9NRN7 309 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 HAUS2Q9NVX0 235 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 SALL4Q9UJQ4 1053 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 DUSP10Q9Y6W6 482 aa10.72□□□□□ -0.69
TRAPPC12-213ENST00000461577 C3orf70A6NLC5 250 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 C4orf47A7E2U8 309 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SLC30A4O14863 429 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 AP1G1O43747 822 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 NRDCO43847 1150 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 CCNCP24863 283 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SERPINA4P29622 427 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 ABL2P42684 1182 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 MMP13P45452 471 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 RGRP47804 291 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 GRIA4P48058 902 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 CSNK1EP49674 416 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SCNN1BP51168 640 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 C21orf59P57076 290 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 RACK1P63244 317 aaKnown RBP10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 GBE1Q04446 702 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 BCL2L1Q07817 233 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 ITKQ08881 620 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SLC10A7Q0GE19 358 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 GRIK2Q13002 908 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 TFDP2Q14188 446 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 PUM1Q14671 1186 aaKnown RBP eCLIP10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 SLC45A4Q5BKX6 768 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 KIAA1161Q6NSJ0 714 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 IL27RAQ6UWB1 636 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 MFSD7Q6UXD7 560 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 HORMAD1Q86X24 394 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 CCDC50Q8IVM0 306 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 CCNYQ8ND76 341 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 CCDC112Q8NEF3 446 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 C1orf216Q8TAB5 229 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 KIAA1524Q8TCG1 905 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 HCAR2Q8TDS4 363 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 KLK6Q92876 244 aa10.71□□□□□ -0.69
TRAPPC12-213ENST00000461577 RBM41Q96IZ5 413 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms