RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 EDIL3O43854 480 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 SKAP2O75563 359 aaPredicted RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 MTA2O94776 668 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 PMS2P2O95744 297 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 KRT18P05783 430 aaKnown RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 CHN1P15882 459 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 KCNA5P22460 613 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 CDKN1AP38936 164 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 PNPLA4P41247 253 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 CKAP5Q14008 2032 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 DCTN1Q14203 1278 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 RBBP5Q15291 538 aaKnown RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 GALNTL6Q49A17 601 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 TTC22Q5TAA0 569 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 TRIM74Q86UV6 250 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 TRIM73Q86UV7 250 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 MB21D2Q8IYB1 491 aaPredicted RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 FAM186BQ8IYM0 893 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 METTL27Q8N6F8 245 aaPredicted RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 NEXN-AS1Q8NBZ9 246 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 MCPH1Q8NEM0 835 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 CTCFLQ8NI51 663 aaPredicted RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 LRRC8CQ8TDW0 803 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 STYXQ8WUJ0 223 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 PRDM8Q9NQV8 689 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 GEMIN8Q9NWZ8 242 aaKnown RBP2.72□□□□□ -1.97
SYPL1-203ENST00000460770 ZNF224Q9NZL3 707 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 OR6C3Q9NZP0 311 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 LRFN1Q9P244 771 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 GAB2Q9UQC2 676 aa2.72□□□□□ -1.97
SYPL1-203ENST00000460770 ERI2A8K979 691 aaKnown RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 TIMM23O14925 209 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 PPM1GO15355 546 aaPredicted RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 XPNPEP2O43895 674 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 CAND2O75155 1236 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 LDLRP01130 860 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 TFPIP10646 304 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 GJC1P36383 396 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 CENPAP49450 140 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 TAF6P49848 677 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 HDAC4P56524 1084 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 CHAF1AQ13111 956 aaPredicted RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 THOC5Q13769 683 aaKnown RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 LPIN1Q14693 890 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 KRT71Q3SY84 523 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 SMIM29Q86T20 159 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 GHDCQ8N2G8 530 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 RASSF8Q8NHQ8 419 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 GRAPLQ8TC17 118 aaPredicted RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 STT3BQ8TCJ2 826 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 PARD3BQ8TEW8 1205 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 USP13Q92995 863 aaPredicted RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 TRAPPC9Q96Q05 1148 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 MVB12BQ9H7P6 319 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 SEPSECSQ9HD40 501 aaKnown RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 WDR6Q9NNW5 1121 aaKnown RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 SPATS2LQ9NUQ6 558 aaKnown RBP2.71□□□□□ -1.98
SYPL1-203ENST00000460770 THAP1Q9NVV9 213 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 ANKRD10Q9NXR5 420 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 KLHL42Q9P2K6 505 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 SIX4Q9UIU6 781 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 PHTF1Q9UMS5 762 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 LRCH1Q9Y2L9 728 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 SNX9Q9Y5X1 595 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 DOCK7Q96N67 2140 aa2.71□□□□□ -1.98
SYPL1-203ENST00000460770 ATXN2Q99700 1313 aaKnown RBP2.7□□□□□ -1.98
SYPL1-203ENST00000460770 hDV102S1A0JD36 115 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SYT5O00445 386 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 TNFRSF6BO95407 300 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 AFPP02771 609 aaKnown RBP2.7□□□□□ -1.98
SYPL1-203ENST00000460770 CTPS1P17812 591 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 PPM1AP35813 382 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 HSD17B4P51659 736 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 ATP12AP54707 1039 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 ARHGAP8P85298 464 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 KIF26BQ2KJY2 2108 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SYNE3Q6ZMZ3 975 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 CCDC129Q6ZRS4 1044 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SLC26A9Q7LBE3 791 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SRLQ86TD4 932 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SFTPA2Q8IWL1 248 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SPEM1Q8N4L4 309 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 IL17RCQ8NAC3 791 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 DBF4BQ8NFT6 615 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 OR4N2Q8NGD1 307 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 GPT2Q8TD30 523 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 FIG4Q92562 907 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SGCZQ96LD1 299 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 PGLYRP2Q96PD5 576 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 PABPC3Q9H361 631 aaKnown RBP2.7□□□□□ -1.98
SYPL1-203ENST00000460770 ZNF334Q9HCZ1 680 aaPredicted RBP2.7□□□□□ -1.98
SYPL1-203ENST00000460770 OBP2BQ9NPH6 170 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 NLRC4Q9NPP4 1024 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 ENTPD7Q9NQZ7 604 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 ATP8A2Q9NTI2 1148 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 SLCO3A1Q9UIG8 710 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 POU2F3Q9UKI9 436 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 CNPY2Q9Y2B0 182 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 CLDN16Q9Y5I7 305 aa2.7□□□□□ -1.98
SYPL1-203ENST00000460770 A0A1W2PS18 150 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms