RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 ZNF805Q5CZA5 627 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 MIIPQ5JXC2 388 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 LRRC31Q6UY01 552 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 TPCN2Q8NHX9 752 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 RAB7BQ96AH8 199 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 C18orf8Q96DM3 657 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 CFAP57Q96MR6 1250 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 SPON2Q9BUD6 331 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.42□□□□□ -0.26
SRRT-206ENST00000460194 LRRC61Q9BV99 259 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 NAA15Q9BXJ9 866 aaKnown RBP13.42□□□□□ -0.26
SRRT-206ENST00000460194 MAGEB5Q9BZ81 275 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 ZYG11BQ9C0D3 744 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 HECAQ9UBI9 543 aaPredicted RBP13.42□□□□□ -0.26
SRRT-206ENST00000460194 ARHGEF17Q96PE2 2063 aaPredicted RBP13.42□□□□□ -0.26
SRRT-206ENST00000460194 ANKRD36A6QL64 1941 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 UBR5O95071 2799 aaPredicted RBP13.42□□□□□ -0.26
SRRT-206ENST00000460194 HECTD1Q9ULT8 2610 aa13.42□□□□□ -0.26
SRRT-206ENST00000460194 LMO7DNF2Z398 122 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 H3BM21 787 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 FGFR1OPO95684 399 aaKnown RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 CYP11B1P15538 503 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 MLLT3P42568 568 aaPredicted RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 FAM102AQ5T9C2 384 aaPredicted RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 CRTC1Q6UUV9 634 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 RBM44Q6ZP01 1051 aaKnown RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 FAM131BQ86XD5 332 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 TP53I13Q8NBR0 393 aaPredicted RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 TMEM35BQ8NCS4 154 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 LMX1AQ8TE12 382 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 BTN2A2Q8WVV5 523 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 ARHGEF2Q92974 986 aaKnown RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 MED8Q96G25 268 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 TM6SF2Q9BZW4 377 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 RETREG1Q9H6L5 497 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 ZDHHC6Q9H6R6 413 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 MBNL1Q9NR56 388 aaKnown RBP13.41□□□□□ -0.26
SRRT-206ENST00000460194 EVA1BQ9NVM1 165 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 PAXBP1Q9Y5B6 917 aa13.41□□□□□ -0.26
SRRT-206ENST00000460194 SPTA1P02549 2419 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 TLN1Q9Y490 2541 aaKnown RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 FAM72CH0Y354 149 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 MUSKO15146 869 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 YY2O15391 372 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 NOBOXO60393 691 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 GSRP00390 522 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 CELA2BP08218 269 aaPredicted RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 SGCGQ13326 291 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 C1orf61Q13536 156 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 NR0B2Q15466 257 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 FAM72AQ5TYM5 149 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 FAM72DQ6L9T8 149 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 NYAP1Q6ZVC0 841 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 NOP9Q86U38 636 aaKnown RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 FAM72BQ86X60 149 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 DRC7Q8IY82 874 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 OR2AP1Q8NGE2 309 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 LIN37Q96GY3 246 aaPredicted RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 IL12RB2Q99665 862 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 NOL6Q9H6R4 1146 aaKnown RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 SYNCQ9H7C4 482 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 KIAA1468Q9P260 1216 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 SPASTQ9UBP0 616 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 APOBEC3BQ9UH17 382 aaKnown RBP13.4□□□□□ -0.26
SRRT-206ENST00000460194 ACSL6Q9UKU0 697 aa13.4□□□□□ -0.26
SRRT-206ENST00000460194 FAM170AA1A519 330 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 TOR1BO14657 336 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 TSHRP16473 764 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 ITIH2P19823 946 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
SRRT-206ENST00000460194 ADRA1BP35368 520 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 DNA2P51530 1060 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 BPIFB4P59827 614 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 YPEL5P62699 121 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 NOMO3P69849 1222 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 MYLK3Q32MK0 819 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 LINC00303Q3SY05 128 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 PRRT3Q5FWE3 981 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 MACC1Q6ZN28 852 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 B3GNT8Q7Z7M8 397 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 PHACTR4Q8IZ21 702 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 EXD3Q8N9H8 876 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 WDR36Q8NI36 951 aaKnown RBP13.39□□□□□ -0.27
SRRT-206ENST00000460194 KLHL32Q96NJ5 620 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 CCDC3Q9BQI4 270 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 TMEM248Q9NWD8 314 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 OR12D3Q9UGF7 316 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 FHOD1Q9Y613 1164 aa13.39□□□□□ -0.27
SRRT-206ENST00000460194 COL12A1Q99715 3063 aa13.38□□□□□ -0.27
SRRT-206ENST00000460194 CCDC187A0A096LP49 1063 aa13.38□□□□□ -0.27
SRRT-206ENST00000460194 A0A1W2PQM1 296 aa13.38□□□□□ -0.27
SRRT-206ENST00000460194 MMP20O60882 483 aa13.38□□□□□ -0.27
SRRT-206ENST00000460194 TNFSF15O95150 251 aa13.38□□□□□ -0.27
SRRT-206ENST00000460194 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
SRRT-206ENST00000460194 LSM8O95777 96 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms