RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FGF10O15520 208 aaPredicted RBP23.11■■□□□ 1.29
PTPN4-207ENST00000460162 BUB1O43683 1085 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 IGSF6O95976 241 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 PAK4O96013 591 aaPredicted RBP23.11■■□□□ 1.29
PTPN4-207ENST00000460162 HTR7P34969 479 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 HNRNPKP61978 463 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTPN4-207ENST00000460162 DAB2P98082 770 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 RAD51Q06609 339 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 SGCGQ13326 291 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 MYLK3Q32MK0 819 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 ACAD10Q6JQN1 1059 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 DCUN1D2Q6PH85 259 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 LEKR1Q6ZMV7 388 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 PARGQ86W56 976 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 VCPIP1Q96JH7 1222 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 KLF6Q99612 283 aaPredicted RBP23.11■■□□□ 1.29
PTPN4-207ENST00000460162 SYT11Q9BT88 431 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 NLGN3Q9NZ94 848 aa23.11■■□□□ 1.29
PTPN4-207ENST00000460162 SPTY2D1-AS1A0A0U1RR47 76 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 FPGTO14772 594 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 FFAR2O15552 330 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 SPINT1O43278 529 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 CREB3O43889 395 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 NME1P15531 152 aaKnown RBP23.1■■□□□ 1.29
PTPN4-207ENST00000460162 TARDBPQ13148 414 aaKnown RBP eCLIP23.1■■□□□ 1.295e-6■□□□□ 11.3
PTPN4-207ENST00000460162 FZD2Q14332 565 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 ATXN7L2Q5T6C5 722 aaPredicted RBP23.1■■□□□ 1.29
PTPN4-207ENST00000460162 C19orf48Q6RUI8 117 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 UMODL1-AS1Q8N2C9 162 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 BAP1Q92560 729 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 HMCESQ96FZ2 354 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 KLHL32Q96NJ5 620 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 BPIFA3Q9BQP9 254 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 TTYH3Q9C0H2 523 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 NRSN2Q9GZP1 204 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 DNAJC28Q9NX36 388 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 GGT7Q9UJ14 662 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 ITM2BQ9Y287 266 aa23.1■■□□□ 1.29
PTPN4-207ENST00000460162 URB1O60287 2271 aaKnown RBP23.09■■□□□ 1.29
PTPN4-207ENST00000460162 A0A087WV48 116 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 NEMP2A6NFY4 417 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 IGLON5A6NGN9 336 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 RASA4BC9J798 803 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 H3BM21 787 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 AREL1O15033 823 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 RASA4O43374 803 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 GIMD1P0DJR0 217 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 CKMT1AP12532 417 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 RHOAP61586 193 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 E2F1Q01094 437 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 COL28A1Q2UY09 1125 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 GDPD4Q6W3E5 623 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 TMC6Q7Z403 805 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 IRF2BP2Q7Z5L9 587 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 DUSP23Q9BVJ7 150 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 USP29Q9HBJ7 922 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 EVA1BQ9NVM1 165 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 DONSONQ9NYP3 566 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 CLCA2Q9UQC9 943 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 MFHAS1Q9Y4C4 1052 aa23.09■■□□□ 1.29
PTPN4-207ENST00000460162 EIF3CLB5ME19 914 aaKnown RBP23.08■■□□□ 1.29
PTPN4-207ENST00000460162 CSF2P04141 144 aa23.08■■□□□ 1.29
PTPN4-207ENST00000460162 INSM1Q01101 510 aaPredicted RBP23.08■■□□□ 1.29
PTPN4-207ENST00000460162 SERINC3Q13530 473 aa23.08■■□□□ 1.29
PTPN4-207ENST00000460162 RTP5Q14D33 572 aa23.08■■□□□ 1.29
PTPN4-207ENST00000460162 DCBLD1Q8N8Z6 715 aa23.08■■□□□ 1.29
PTPN4-207ENST00000460162 ZNF548Q8NEK5 533 aaPredicted RBP23.08■■□□□ 1.29
PTPN4-207ENST00000460162 EIF3CQ99613 913 aaKnown RBP23.08■■□□□ 1.29
PTPN4-207ENST00000460162 DKK3Q9UBP4 350 aa23.08■■□□□ 1.29
PTPN4-207ENST00000460162 SCAMP1O15126 338 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 TNFAIP3P21580 790 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 TPI1P60174 286 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 PFN3P60673 137 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 OGDHQ02218 1023 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 PDE1CQ14123 709 aaPredicted RBP23.07■■□□□ 1.28
PTPN4-207ENST00000460162 ANO6Q4KMQ2 910 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 ZNF542PQ5EBM4 170 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 PDZD3Q86UT5 571 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 FAM181AQ8N9Y4 354 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 C1QTNF7Q9BXJ2 289 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 KLC2Q9H0B6 622 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 RTN4Q9NQC3 1192 aaKnown RBP23.07■■□□□ 1.28
PTPN4-207ENST00000460162 PARVAQ9NVD7 372 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 TAS2R14Q9NYV8 317 aa23.07■■□□□ 1.28
PTPN4-207ENST00000460162 LRRC53A6NM62 1247 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 TEX33O43247 280 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 GP1BAP07359 652 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 SUOXP51687 545 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 MAMLD1Q13495 774 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 PLEKHA7Q6IQ23 1121 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 APOLD1Q96LR9 279 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 CPEB1Q9BZB8 566 aaKnown RBP23.06■■□□□ 1.28
PTPN4-207ENST00000460162 LRRC19Q9H756 370 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 TMEM63CQ9P1W3 806 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 LHX3Q9UBR4 397 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 UBA2Q9UBT2 640 aaPredicted RBP23.06■■□□□ 1.28
PTPN4-207ENST00000460162 IPO11Q9UI26 975 aaKnown RBP23.06■■□□□ 1.28
PTPN4-207ENST00000460162 AP4E1Q9UPM8 1137 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 CSNK1G3Q9Y6M4 447 aa23.06■■□□□ 1.28
PTPN4-207ENST00000460162 K7ESM1 405 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms