RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 GABPB2Q8TAK5 448 aaPredicted RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 USP33Q8TEY7 942 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 SMG7Q92540 1137 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 CDKL2Q92772 493 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ARHGEF2Q92974 986 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 PRICKLE1Q96MT3 831 aaPredicted RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 PWWP2AQ96N64 755 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CYTH2Q99418 400 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 EBNA1BP2Q99848 306 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 APOL5Q9BWW9 433 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CEP41Q9BYV8 373 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 POLR1EQ9GZS1 481 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 IL22Q9GZX6 179 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 MUC3BQ9H195 1237 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 SLC25A51Q9H1U9 297 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ACSS3Q9H6R3 686 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CNOT10Q9H9A5 744 aaKnown RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 LRRC4CQ9HCJ2 640 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ATP13A1Q9HD20 1204 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 NDFIP2Q9NV92 336 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 SENP1Q9P0U3 644 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 BCCIPQ9P287 314 aaKnown RBP eCLIP9.08□□□□□ -0.96
VPS50-207ENST00000458530 PSMC3IPQ9P2W1 217 aaPredicted RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 UBA2Q9UBT2 640 aaPredicted RBP9.08□□□□□ -0.96
VPS50-207ENST00000458530 LIMD1Q9UGP4 676 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 DUSP12Q9UNI6 340 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 MAD1L1Q9Y6D9 718 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 CFAP47Q6ZTR5 3102 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 ATRXP46100 2492 aa9.08□□□□□ -0.96
VPS50-207ENST00000458530 MYLKQ15746 1914 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 BAHCC1Q9P281 2608 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CXorf51AA0A1B0GTR3 108 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CCDC195A0A1B0GUA6 201 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 TLDC2A0PJX2 215 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 POLR3GO15318 223 aaPredicted RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 KDELR3O43731 214 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 RFPL2O75678 378 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 PAPLNO95428 1278 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 SHBGP04278 402 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 HLA-DQB2P05538 268 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 POLBP06746 335 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 NR1D1P20393 614 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 WEE1P30291 646 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CD68P34810 354 aaPredicted RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 IRAK1P51617 712 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 ITKQ08881 620 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 USP4Q13107 963 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 FASTKD3Q14CZ7 662 aaKnown RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 TEAD2Q15562 447 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 PRSS36Q5K4E3 855 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 KCTD11Q693B1 232 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CES5AQ6NT32 575 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CIR1Q86X95 450 aaPredicted RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 MFN1Q8IWA4 741 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CARNMT1Q8N4J0 409 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 DCAF4L2Q8NA75 395 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 UHMK1Q8TAS1 419 aaKnown RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 GSDMBQ8TAX9 411 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 SH3RF2Q8TEC5 729 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 DDI1Q8WTU0 396 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CFAP36Q96G28 342 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 SLC22A12Q96S37 553 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CYP2S1Q96SQ9 504 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 TBL1YQ9BQ87 522 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 SPON2Q9BUD6 331 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 C2orf49Q9BVC5 232 aaPredicted RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 CINPQ9BW66 212 aaPredicted RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 SLC46A2Q9BY10 475 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 MFSD1Q9H3U5 465 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 NT5MQ9NPB1 228 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 CASS4Q9NQ75 786 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 TDP1Q9NUW8 608 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 HCFC1R1Q9NWW0 138 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 DLGAP2Q9P1A6 1054 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 DNMT3BQ9UBC3 853 aaKnown RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 LGALS13Q9UHV8 139 aa9.07□□□□□ -0.96
VPS50-207ENST00000458530 MRPS23Q9Y3D9 190 aaKnown RBP9.07□□□□□ -0.96
VPS50-207ENST00000458530 KIF26AQ9ULI4 1882 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 SMIM23A6NLE4 172 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 TSPAN3O60637 253 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 S1PR4O95977 384 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 INHBAP08476 426 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 SERPINF2P08697 491 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 GBP2P32456 591 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 MSH2P43246 934 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 SESN2P58004 480 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 GAD2Q05329 585 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 GABPB1Q06547 395 aaPredicted RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 TDGQ13569 410 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 FRG1Q14331 258 aaKnown RBP9.06□□□□□ -0.96
VPS50-207ENST00000458530 LONRF1Q17RB8 773 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 MSS51Q4VC12 460 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 TTMPQ5BVD1 217 aa9.06□□□□□ -0.96
VPS50-207ENST00000458530 RALGPS1Q5JS13 557 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms