RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SERPINB6P35237 376 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 CYLC1P35663 651 aaPredicted RBP18.94■□□□□ 0.62
USP39-209ENST00000458268 ABL2P42684 1182 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 ZNF235Q14590 738 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 STAT4Q14765 748 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 SPA17Q15506 151 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 ODF2Q5BJF6 829 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 IL27RAQ6UWB1 636 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 TRIM69Q86WT6 500 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 RHOT2Q8IXI1 618 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 LZTR1Q8N653 840 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 TSEN2Q8NCE0 465 aaKnown RBP18.94■□□□□ 0.62
USP39-209ENST00000458268 SETD7Q8WTS6 366 aaKnown RBP18.94■□□□□ 0.62
USP39-209ENST00000458268 RFFLQ8WZ73 363 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 SKA1Q96BD8 255 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 SLC32A1Q9H598 525 aa18.94■□□□□ 0.62
USP39-209ENST00000458268 CNOT1A5YKK6 2376 aaKnown RBP18.93■□□□□ 0.62
USP39-209ENST00000458268 KNL1Q8NG31 2342 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 CXorf51AA0A1B0GTR3 108 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 LRRD1A4D1F6 860 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 SOWAHDA6NJG2 315 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 TM4SF5O14894 197 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 KRT1P04264 644 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 KRT7P08729 469 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 RGRP47804 291 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 IL10RBQ08334 325 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 DPYSL3Q14195 570 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 AFMIDQ63HM1 303 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 TTC7BQ86TV6 843 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 HORMAD1Q86X24 394 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 NSMCE1Q8WV22 266 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 FAM131CQ96AQ9 280 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 CAMK1GQ96NX5 476 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 OSBPL1AQ9BXW6 950 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 TM7SF3Q9NS93 570 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 LCMT1Q9UIC8 334 aa18.93■□□□□ 0.62
USP39-209ENST00000458268 TTC24A2A3L6 582 aaPredicted RBP18.92■□□□□ 0.62
USP39-209ENST00000458268 H0Y8X5 98 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 LATO43561 262 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 SPOPO43791 374 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 MFSD11O43934 449 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 SH3BP5O60239 455 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 ITIH2P19823 946 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 LBRQ14739 615 aaKnown RBP18.92■□□□□ 0.62
USP39-209ENST00000458268 TMCO4Q5TGY1 634 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 MAP7D3Q8IWC1 876 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 PLPP6Q8IY26 295 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.92■□□□□ 0.62
USP39-209ENST00000458268 TSC1Q92574 1164 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 LRIG1Q96JA1 1093 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 WRAP53Q9BUR4 548 aaKnown RBP18.92■□□□□ 0.62
USP39-209ENST00000458268 DNAAF2Q9NVR5 837 aaKnown RBP18.92■□□□□ 0.62
USP39-209ENST00000458268 ZFR2Q9UPR6 939 aaKnown RBP18.92■□□□□ 0.62
USP39-209ENST00000458268 PCDHB9Q9Y5E1 797 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 FADS3Q9Y5Q0 445 aa18.92■□□□□ 0.62
USP39-209ENST00000458268 SPAARA0A1B0GVQ0 90 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 GJB3O75712 270 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 IPO7O95373 1038 aaKnown RBP18.91■□□□□ 0.62
USP39-209ENST00000458268 PRKCGP05129 697 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 AKT2P31751 481 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 MAN1A1P33908 653 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 SCNN1BP51168 640 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 CLDN2P57739 230 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 SEMG2Q02383 582 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 SLC10A7Q0GE19 358 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 ANKRD20A8PQ5CZ79 823 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 SRLQ86TD4 932 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 CAMK1DQ8IU85 385 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.91■□□□□ 0.62
USP39-209ENST00000458268 LRRN4Q8WUT4 740 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 FEM1CQ96JP0 617 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 GOLPH3Q9H4A6 298 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 LUC7LQ9NQ29 371 aaKnown RBP18.91■□□□□ 0.62
USP39-209ENST00000458268 GDF3Q9NR23 364 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 SEPT3Q9UH03 358 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 TPX2Q9ULW0 747 aaKnown RBP18.91■□□□□ 0.62
USP39-209ENST00000458268 DMTF1Q9Y222 760 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 PCDHA13Q9Y5I0 950 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 DCHS1Q96JQ0 3298 aa18.91■□□□□ 0.62
USP39-209ENST00000458268 IGLON5A6NGN9 336 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PRAMEF26H0Y7S4 382 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 VILLO15195 856 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 NEBLO76041 1014 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 CD59P13987 128 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 CTSKP43235 329 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 NAP1L1P55209 391 aaKnown RBP18.9■□□□□ 0.62
USP39-209ENST00000458268 ITKQ08881 620 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 SGCGQ13326 291 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PDK2Q15119 407 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 ZNF284Q2VY69 593 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 N4BP2L1Q5TBK1 243 aaPredicted RBP18.9■□□□□ 0.62
USP39-209ENST00000458268 NCBP2-AS2Q69YL0 99 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PTAR1Q7Z6K3 402 aaPredicted RBP18.9■□□□□ 0.62
USP39-209ENST00000458268 NAXDQ8IW45 347 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PCDH19Q8TAB3 1148 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 CXorf40AQ8TE69 158 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PDCD6IPQ8WUM4 868 aaKnown RBP18.9■□□□□ 0.62
USP39-209ENST00000458268 RAPGEF5Q92565 580 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 PANX2Q96RD6 677 aa18.9■□□□□ 0.62
USP39-209ENST00000458268 ZNF670Q9BS34 389 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms