RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 DUPD1Q68J44 220 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 OTOP3Q7RTS5 596 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 IRF2BP2Q7Z5L9 587 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MILR1Q7Z6M3 343 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 DNAAF5Q86Y56 855 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 RBM15BQ8NDT2 890 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 OLIG1Q8TAK6 271 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TTC8Q8TAM2 541 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CKAP2Q8WWK9 683 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF516Q92618 1163 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ERLEC1Q96DZ1 483 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CGRRF1Q99675 332 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 FDXACB1Q9BRP7 624 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 BTBD10Q9BSF8 475 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MTG1Q9BT17 334 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SYT11Q9BT88 431 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CCDC106Q9BWC9 280 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TXLNGYQ9BZA5 131 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CDT1Q9H211 546 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TP63Q9H3D4 680 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 HIPK3Q9H422 1215 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 NHEJ1Q9H9Q4 299 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 EPB41L5Q9HCM4 733 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 WDR6Q9NNW5 1121 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TOPORSQ9NS56 1045 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 GDAP2Q9NXN4 497 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 NENFQ9UMX5 172 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 AKT3Q9Y243 479 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PCDHGA8Q9Y5G5 932 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 BRCA2P51587 3418 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PTPRJQ12913 1337 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF98A6NK75 572 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 A8MVJ9 347 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ATP6V1G2-DDX39BF2Z307 99 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ZNF263O14978 683 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 B4GALT5O43286 388 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 BUD23O43709 281 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 GREM1O60565 184 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 KATNA1O75449 491 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MYO1DO94832 1006 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SHBGP04278 402 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PLEKP08567 350 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TFPTP0C1Z6 253 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 FAM153BP0C7A2 387 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 T-ENOLP0DO92 83 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MCF2P10911 925 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ANPEPP15144 967 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ARF4P18085 180 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CTNNA2P26232 953 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CCND3P30281 292 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 OR3A3P47888 321 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 HOXA1P49639 335 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 STARP49675 285 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ACOT2P49753 483 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SLC18A1P54219 525 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ERVK-21P61565 698 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 UBE2IP63279 158 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PHC1P78364 1004 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TRPC3Q13507 836 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 GEN1Q17RS7 908 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 FAM153CQ494X1 144 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ESCO2Q56NI9 601 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PRMT9Q6P2P2 845 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CCDC36Q8IYA8 594 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CATSPER1Q8NEC5 780 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 FBXL13Q8NEE6 735 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SETD7Q8WTS6 366 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SEMA4DQ92854 862 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MYDGFQ969H8 173 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MAP6Q96JE9 813 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 MLPHQ9BV36 600 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PAIP1Q9H074 479 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 PDZD7Q9H5P4 517 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 RIC8BQ9NVN3 520 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 SNTG2Q9NY99 539 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 RBAKQ9NYW8 714 aaPredicted RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ANKFY1Q9P2R3 1169 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 FAM153AQ9UHL3 310 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ADGRE2Q9UHX3 823 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 TMEM59LQ9UK28 342 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 POU2F3Q9UKI9 436 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 ZMIZ1Q9ULJ6 1067 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 CNOT6Q9ULM6 557 aaKnown RBP6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 GUCA1BQ9UMX6 200 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 INVSQ9Y283 1065 aa6.92□□□□□ -1.3
CUBNP3-201ENST00000457461 C15orf38-AP3S2A0A0A6YYH1 394 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 C17orf102A2RUQ5 167 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 H0YJX3 145 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 TREHO43280 583 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SPOPO43791 374 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SSX5O60225 188 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 FKTNO75072 461 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 LRRN2O75325 713 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 PTP4A3O75365 173 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 HAUS5O94927 633 aa6.91□□□□□ -1.3
CUBNP3-201ENST00000457461 SNX4O95219 450 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms