RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 ARHGAP36Q6ZRI8 547 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 PARS2Q7L3T8 475 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 CPNE8Q86YQ8 564 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 TMTC1Q8IUR5 882 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 ATPAF2Q8N5M1 289 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 ORAI3Q9BRQ5 295 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 MAK16Q9BXY0 300 aaKnown RBP18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 LHX3Q9UBR4 397 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 MFHAS1Q9Y4C4 1052 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 PCDHB9Q9Y5E1 797 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
PDLIM2-215ENST00000456545 GOLGA6L6A8MZA4 724 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 KCNK3O14649 394 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 TSPAN6O43657 245 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 CD48P09326 243 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 AKT2P31751 481 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 RPS21P63220 83 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 SGCGQ13326 291 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 DPYSL3Q14195 570 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF235Q14590 738 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 LBRQ14739 615 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 SUZ12Q15022 739 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 ANKRD20A8PQ5CZ79 823 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 PSAPL1Q6NUJ1 521 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 SRLQ86TD4 932 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 TP53INP2Q8IXH6 220 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 DEFB124Q8NES8 71 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 TSC1Q92574 1164 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF599Q96NL3 588 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 CPEB1Q9BZB8 566 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 TM7SF3Q9NS93 570 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 SEPT3Q9UH03 358 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 FADS3Q9Y5Q0 445 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 DMXL1Q9Y485 3027 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 SPTBN4Q9H254 2564 aa18.31■□□□□ 0.52
PDLIM2-215ENST00000456545 PCDH15Q96QU1 1955 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 TLR4O00206 839 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 INSIG1O15503 277 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 AP1G1O43747 822 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 SPOPO43791 374 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 DFNA5O60443 496 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 NEBLO76041 1014 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 MTA2O94776 668 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 CEACAM1P13688 526 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 PRLRP16471 622 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 CSRP1P21291 193 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 IL4RP24394 825 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 SLC1A1P43005 524 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 SCNN1BP51168 640 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 BNC1Q01954 994 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 TMCO4Q5TGY1 634 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 KIAA1161Q6NSJ0 714 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 LRRC49Q8IUZ0 686 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 MFSD2AQ8NA29 543 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 FAM71BQ8TC56 605 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 SETD7Q8WTS6 366 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 MYOCQ99972 504 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF670Q9BS34 389 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 SUV39H2Q9H5I1 410 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 ATP13A3Q9H7F0 1226 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 IL21RQ9HBE5 538 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 GDF3Q9NR23 364 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 EPN1Q9Y6I3 576 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 PLXNA2O75051 1894 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 CEP250Q9BV73 2442 aa18.3■□□□□ 0.52
PDLIM2-215ENST00000456545 LRRD1A4D1F6 860 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 WNT9AO14904 365 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 PIGNO95427 931 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 HNRNPA2B1P22626 353 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 KDELR1P24390 212 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 SERPINA4P29622 427 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 CSNK1DP48730 415 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 ARSEP51690 589 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 NAP1L1P55209 391 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 BCL2L1Q07817 233 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 NSUN2Q08J23 767 aaKnown RBP eCLIP18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF284Q2VY69 593 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 MARC1Q5VT66 337 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 SEL1L3Q68CR1 1132 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 ZSCAN30Q86W11 494 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 RHOT1Q8IXI2 618 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 KLHDC7BQ96G42 594 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF641Q96N77 438 aaPredicted RBP18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 TUBGCP5Q96RT8 1024 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 SLC17A9Q9BYT1 436 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 DKK3Q9UBP4 350 aa18.29■□□□□ 0.52
PDLIM2-215ENST00000456545 SOWAHDA6NJG2 315 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 UPK3BL1B0FP48 263 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 UPK3BL2E5RIL1 263 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 NDUFA10O95299 355 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 LCA5LO95447 670 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 PAK4O96013 591 aaPredicted RBP18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 WNT1P04628 370 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 ZNF883P0CG24 379 aa18.28■□□□□ 0.52
PDLIM2-215ENST00000456545 ABL2P42684 1182 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms