RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 GCNT1Q02742 428 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIM25Q14258 630 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PPP4R4Q6NUP7 873 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 UGT3A1Q6NUS8 523 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CNSTQ6PJW8 725 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM179BQ7Z7N9 219 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 CLEC14AQ86T13 490 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 MCF2L2Q86YR7 1114 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM83FQ8NEG4 500 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 DEPDC1BQ8WUY9 529 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PCNPQ8WW12 178 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TEKT1Q969V4 418 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PYCR2Q96C36 320 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SGF29Q96ES7 293 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 MFSD14AQ96MC6 490 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 APOL2Q9BQE5 337 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ADI1Q9BV57 179 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TARS2Q9BW92 718 aaKnown RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 PTPRHQ9HD43 1115 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 KCNH7Q9NS40 1196 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 IL37Q9NZH6 218 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 TBC1D14Q9P2M4 693 aa4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 SEPT9Q9UHD8 586 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 MAGED2Q9UNF1 606 aaPredicted RBP4.6□□□□□ -1.67
DEPDC1-202ENST00000456315 ASPDHA6ND91 283 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF839A8K0R7 811 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 WDR64B1ANS9 1081 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 WDR46O15213 610 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 MARCH6O60337 910 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 SYNCRIPO60506 623 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ICMTO60725 284 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CHEK2O96017 543 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PGK1P00558 417 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 DNTTP04053 509 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 GJB1P08034 283 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF250P15622 560 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 HADHAP40939 763 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ZNF132P52740 706 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 EPS8Q12929 822 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PRKG1Q13976 671 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PTPRCAPQ14761 206 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TRIM16LQ309B1 348 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TMEM236Q5W0B7 351 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 STEAP3Q658P3 488 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ARHGAP17Q68EM7 881 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 FSTL4Q6MZW2 842 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 RNF168Q8IYW5 571 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 C12orf29Q8N999 325 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CXorf38Q8TB03 319 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CERKQ8TCT0 537 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ATL1Q8WXF7 558 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TRMT61AQ96FX7 289 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CFAP36Q96G28 342 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 RMND5BQ96G75 393 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 FERMT1Q9BQL6 677 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 OSBPL10Q9BXB5 764 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 BEX2Q9BXY8 128 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 SMARCAD1Q9H4L7 1026 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 GDAP2Q9NXN4 497 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 BTG4Q9NY30 223 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 IFT80Q9P2H3 777 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDHGC3Q9UN70 934 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ZCWPW2A0A1B0GU75 182 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 KCNK1O00180 336 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TNFRSF10AO00220 468 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CALUO43852 315 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TMCC2O75069 709 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 SEC14L2O76054 403 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 UGT2B4P06133 528 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 INHBAP08476 426 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC7A2P52569 658 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ADAM17P78536 824 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CYP24A1Q07973 514 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 GRSF1Q12849 480 aaKnown RBP eCLIP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 LAPTM4AQ15012 233 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 IMPG1Q17R60 797 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 SLC10A5Q5PT55 438 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 DARS2Q6PI48 645 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 GDPD3Q7L5L3 318 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PHF13Q86YI8 300 aaPredicted RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 C12orf56Q8IXR9 622 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CADM2Q8N3J6 435 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 RAB3IL1Q8TBN0 382 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CLEC4CQ8WTT0 213 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TRUB1Q8WWH5 349 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 CRISPLD1Q9H336 500 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 IKZF5Q9H5V7 419 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ZBTB26Q9HCK0 441 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 FRMD4BQ9Y2L6 1034 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 PCDHA11Q9Y5I1 949 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 HEATR1Q9H583 2144 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TTC34A8MYJ7 566 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 DLX3O60479 287 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 TBCAO75347 108 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 FAM13AO94988 1023 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 GOT2P00505 430 aaKnown RBP4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 KRT1P04264 644 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 NCK1P16333 377 aa4.59□□□□□ -1.67
DEPDC1-202ENST00000456315 ME2P23368 584 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms