RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 GNA12Q03113 381 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 RAD51Q06609 339 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 EIF3IQ13347 325 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 CDKN3Q16667 212 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 TPD52L1Q16890 204 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF805Q5CZA5 627 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ARHGAP40Q5TG30 622 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ESRP1Q6NXG1 681 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 GJB7Q6PEY0 223 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 XKR5Q6UX68 686 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 EFL1Q7Z2Z2 1120 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC47A2Q86VL8 602 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 FAM71AQ8IYT1 594 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SDR16C5Q8N3Y7 309 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 WDR36Q8NI36 951 aaKnown RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 LMX1AQ8TE12 382 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF462Q96JM2 2506 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 BMFQ96LC9 184 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC46A1Q96NT5 459 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SLC13A1Q9BZW2 595 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 OSBPL2Q9H1P3 480 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 MPP6Q9NZW5 540 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 HECAQ9UBI9 543 aaPredicted RBP8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 DNAJC12Q9UKB3 198 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 SATB2Q9UPW6 733 aa8.16□□□□□ -1.1
NIF3L1-209ENST00000454952 CCDC187A0A096LP49 1063 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 LY6G6EA0A0G2JKS1 128 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 POM121BA6NF01 834 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 IGLON5A6NGN9 336 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 C16orf96A6NNT2 1141 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 TMEM110-MUSTN1A8MSY1 372 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 B8ZZF3 427 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 LMO7DNF2Z398 122 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 FOXN3O00409 490 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ZMPSTE24O75844 475 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 NEBLO76041 1014 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ENDOD1O94919 500 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 POP4O95707 220 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 GSRP00390 522 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 C6P13671 934 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 SUOXP51687 545 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 PFN3P60673 137 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 NRG1Q02297 640 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 SPIDRQ14159 915 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 MAN2A1Q16706 1144 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ZNF542PQ5EBM4 170 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 C3orf38Q5JPI3 329 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 OTUD1Q5VV17 481 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 LVRNQ6Q4G3 990 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ADGRD1Q6QNK2 874 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 CCDC81Q6ZN84 652 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 PARS2Q7L3T8 475 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 FSTL5Q8N475 847 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 RYBPQ8N488 228 aaPredicted RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 MLKLQ8NB16 471 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 OR7D4Q8NG98 312 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 OR6C4Q8NGE1 309 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ATL2Q8NHH9 583 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 CASKIN2Q8WXE0 1202 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 COL26A1Q96A83 441 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 MED8Q96G25 268 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 TBCBQ99426 244 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 BOCQ9BWV1 1114 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 STRADBQ9C0K7 418 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 MAGEH1Q9H213 219 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 ZDHHC6Q9H6R6 413 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 CPNE5Q9HCH3 593 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 APOBEC3BQ9UH17 382 aaKnown RBP8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 DOLKQ9UPQ8 538 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 U3KQA8 63 aa8.15□□□□□ -1.1
NIF3L1-209ENST00000454952 KIF26BQ2KJY2 2108 aa8.15□□□□□ -1.11
NIF3L1-209ENST00000454952 CDRT15L2A8MXV6 281 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 K7ENP7 123 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 KRIT1O00522 736 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 MUSKO15146 869 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 RAD51BO15315 384 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 ZNF821O75541 412 aaPredicted RBP8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 TM7SF2O76062 418 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 ITGA2BP08514 1039 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 ALPIP09923 528 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 CYP11B1P15538 503 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 RHOQP17081 205 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 TGM2P21980 687 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 HTR1BP28222 390 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 PEX5P50542 639 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 ARF5P84085 180 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 SKOR1P84550 965 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 PPARDQ03181 441 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 FGL2Q14314 439 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 ELOCQ15369 112 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 DEFB133Q30KQ1 61 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 PRRT3Q5FWE3 981 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 FAXCQ5TGI0 409 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 GUSBP11Q6P575 273 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 INO80CQ6PI98 192 aaPredicted RBP8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 PCSK4Q6UW60 755 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 MACC1Q6ZN28 852 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 CLEC14AQ86T13 490 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 TTC7BQ86TV6 843 aa8.14□□□□□ -1.11
NIF3L1-209ENST00000454952 XYLT1Q86Y38 959 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms