RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 MRGBPQ9NV56 204 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 SLC38A7Q9NVC3 462 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 FBXO5Q9UKT4 447 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TIMM22Q9Y584 194 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 A0A1W2PQH9 124 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 AXIN1O15169 862 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 E2F6O75461 281 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 WEE1P30291 646 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 GABRB2P47870 512 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 WNT3AP56704 352 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CST9Q5W186 159 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 ANGPTL8Q6UXH0 198 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 FSTL5Q8N475 847 aaPredicted RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 ST13P5Q8NFI4 369 aaPredicted RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 OR9I1Q8NGQ6 314 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 NCLNQ969V3 563 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 C1orf50Q9BV19 199 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CRTAC1Q9NQ79 661 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 LATS2Q9NRM7 1088 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TRMT13Q9NUP7 481 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 KANSL3Q9P2N6 904 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 FZD10Q9ULW2 581 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 KCNU1A8MYU2 1149 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 AURKAO14965 403 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 ANGPT2O15123 496 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 SPATA31D3P0C874 917 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 LHX1P48742 406 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 RPL14P50914 215 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 SPATA31D4Q6ZUB0 917 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 FRA10AC1Q70Z53 315 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 NPWQ8N729 165 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 OR6Y1Q8NGX8 325 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 DNAJB14Q8TBM8 379 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TRPC4APQ8TEL6 797 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 TM6SF2Q9BZW4 377 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 UPF3AQ9H1J1 476 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 CATSPERBQ9H7T0 1116 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 MID1IP1Q9NPA3 183 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 CD274Q9NZQ7 290 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 PADI3Q9ULW8 664 aa11.29□□□□□ -0.6
DDR1-240ENST00000454612 RBMX2Q9Y388 322 aaKnown RBP11.29□□□□□ -0.6
DDR1-240ENST00000454612 MAP1BP46821 2468 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 ARL5CA6NH57 179 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 HNRNPCL1O60812 293 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 THRAP10827 490 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 IMPDH2P12268 514 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 EDNRBP24530 442 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 GGT5P36269 586 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 PPIDQ08752 370 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 DPYSL2Q16555 572 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 LSM12Q3MHD2 195 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 GPR158Q5T848 1215 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 TEDDM1Q5T9Z0 273 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 TBATAQ96M53 351 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 SMOQ99835 787 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 SEMA3CQ99985 751 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 WDR41Q9HAD4 459 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 EFCAB1Q9HAE3 211 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 UXTQ9UBK9 157 aaPredicted RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 CIDEBQ9UHD4 219 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ZNF232Q9UNY5 417 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ZNF839A8K0R7 811 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 UBDO15205 165 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 GCATO75600 419 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ANXA9O76027 345 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 SIX3O95343 332 aaPredicted RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 SERPINA6P08185 405 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 PSMC3P17980 439 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 PIK3R1P27986 724 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 AQP4P55087 323 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 RBM20Q5T481 1227 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 LINGO4Q6UY18 593 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ASRGL1Q7L266 308 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 LRRC52Q8N7C0 313 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 LRRC39Q96DD0 335 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 MTFMTQ96DP5 389 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 CNDP1Q96KN2 507 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 NAT9Q9BTE0 207 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 KLHL4Q9C0H6 718 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 RGS18Q9NS28 235 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ZMYM5Q9UJ78 669 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 MYADML2A6NDP7 307 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ABLIM1O14639 778 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 SH3BP5O60239 455 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 OAS1P00973 400 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 CCR3P51677 355 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 TBX4P57082 545 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 DAOAP59103 153 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 ATP1A4Q13733 1029 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
DDR1-240ENST00000454612 SPANXN3Q5MJ09 141 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 TMTC4Q5T4D3 741 aa11.28□□□□□ -0.6
DDR1-240ENST00000454612 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms