RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 CASQ1P31415 396 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 GKP32189 559 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CETN2P41208 172 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 PTGER3P43115 390 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CLCN6P51797 869 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 EIF3EP60228 445 aaKnown RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 RPL6Q02878 288 aaKnown RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 PDK1Q15118 436 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 DUOXA1Q1HG43 343 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 LONRF2Q1L5Z9 754 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 HNRNPA1L2Q32P51 320 aaKnown RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 INO80DQ53TQ3 878 aaPredicted RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 RETSATQ6NUM9 610 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 SERPINA13PQ6UXR4 307 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 UNQ6494/PRO21346Q6UXR6 183 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 Q6ZVU0 165 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 LRRC49Q8IUZ0 686 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CCDC13Q8IYE1 715 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 HDDC3Q8N4P3 179 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 ATPAF2Q8N5M1 289 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 TSEN2Q8NCE0 465 aaKnown RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CHST14Q8NCH0 376 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CCNYQ8ND76 341 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 OR2A12Q8NGT7 310 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 UCMAQ8WVF2 138 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 QKIQ96PU8 341 aaKnown RBP eCLIP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 CEP41Q9BYV8 373 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 SLC6A17Q9H1V8 727 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 UBA2Q9UBT2 640 aaPredicted RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 MBD1Q9UIS9 605 aaPredicted RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 PILRBQ9UKJ0 227 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 DNPEPQ9ULA0 475 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 SAR1BQ9Y6B6 198 aa15.9■□□□□ 0.14
VCX3B-204ENST00000453306 MUC22E2RYF6 1773 aaPredicted RBP15.9■□□□□ 0.14
VCX3B-204ENST00000453306 NUP205Q92621 2012 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CXorf51AA0A1B0GTR3 108 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 TMEM8BA6NDV4 472 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CES2O00748 559 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 INSIG1O15503 277 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 LIASO43766 372 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 JCHAINP01591 159 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CFIP05156 583 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 TCP1P17987 556 aaKnown RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 MX2P20592 715 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 RBL1P28749 1068 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 MAPK8P45983 427 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CAMK2GQ13555 558 aaPredicted RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 LBRQ14739 615 aaKnown RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 OASLQ15646 514 aaKnown RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 ATXN7L2Q5T6C5 722 aaPredicted RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 PEAR1Q5VY43 1037 aaPredicted RBP15.89■□□□□ 0.13
VCX3B-204ENST00000453306 C22orf39Q6P5X5 142 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 ACTRT1Q8TDG2 376 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 FATE1Q969F0 183 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CAPZA3Q96KX2 299 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 ZNF599Q96NL3 588 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 IL12RB2Q99665 862 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 AP1M1Q9BXS5 423 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 SP110Q9HB58 689 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 SLC25A13Q9UJS0 675 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 HPCAL4Q9UM19 191 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 SLC6A14Q9UN76 642 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CEP295Q9C0D2 2601 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 CHD5Q8TDI0 1954 aa15.89■□□□□ 0.13
VCX3B-204ENST00000453306 ZSCAN5CA6NGD5 496 aaPredicted RBP15.88■□□□□ 0.13
VCX3B-204ENST00000453306 UPK3BL1B0FP48 263 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 UPK3BL2E5RIL1 263 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 EPHX1P07099 455 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 CTSLP07711 333 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 RBP3P10745 1247 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 CCNB1P14635 433 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 GABRG2P18507 467 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 CR2P20023 1033 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 PTPN3P26045 913 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 KCNJ1P48048 391 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 METAP1P53582 386 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 COPAP53621 1224 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 MAXP61244 160 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 IFI35P80217 286 aaPredicted RBP15.88■□□□□ 0.13
VCX3B-204ENST00000453306 NIPAL4Q0D2K0 466 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 AP1B1Q10567 949 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 XRCC4Q13426 336 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 SNX1Q13596 522 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 ACCSLQ4AC99 568 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 SLC45A4Q5BKX6 768 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 TMCO4Q5TGY1 634 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 CCDC181Q5TID7 509 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 TTC27Q6P3X3 843 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 DPY19L3Q6ZPD9 716 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 PRUNE1Q86TP1 453 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 STK40Q8N2I9 435 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 FRMD1Q8N878 549 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 DEFB124Q8NES8 71 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 OR6K2Q8NGY2 324 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 TFB1MQ8WVM0 346 aaKnown RBP15.88■□□□□ 0.13
VCX3B-204ENST00000453306 ISG20Q96AZ6 181 aaKnown RBP15.88■□□□□ 0.13
VCX3B-204ENST00000453306 EXOC2Q96KP1 924 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 TM6SF2Q9BZW4 377 aa15.88■□□□□ 0.13
VCX3B-204ENST00000453306 MKRN2Q9H000 416 aaKnown RBP15.88■□□□□ 0.13
VCX3B-204ENST00000453306 TMEM74BQ9NUR3 256 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms