RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FAM149AA5PLN7 773 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 WASH4PA8MWX3 477 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 EIF3CLB5ME19 914 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 DAPK3O43293 454 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 CKMT2P17540 419 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 HNF1BP35680 557 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 PRKCIP41743 596 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 SERINC3Q13530 473 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 IQCB1Q15051 598 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 GCNT7Q6ZNI0 430 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ABI3BPQ7Z7G0 1075 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 TTC7BQ86TV6 843 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 EIF3CQ99613 913 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 DHX35Q9H5Z1 703 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 CNOT8Q9UFF9 292 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 PCSK1NQ9UHG2 260 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 MYLKQ15746 1914 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 CACNA1GO43497 2377 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 SYCE3A1L190 88 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 TMEM191CA6NGB0 347 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 IGLON5A6NGN9 336 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 EEF2KO00418 725 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 FPGTO14772 594 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 PRPSAP2O60256 369 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 JUPP14923 745 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 DGKAP23743 735 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ABL2P42684 1182 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ACADVLP49748 655 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 FGL2Q14314 439 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 NR1I3Q14994 352 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 E4F1Q66K89 784 aaPredicted RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 KANSL1Q7Z3B3 1105 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 DNAAF5Q86Y56 855 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 SLC25A45Q8N413 288 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 PDCD7Q8N8D1 485 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 NETO2Q8NC67 525 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ZNF653Q96CK0 615 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 IFT43Q96FT9 208 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 NCAPGQ9BPX3 1015 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 C1QTNF2Q9BXJ5 285 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 KLC2Q9H0B6 622 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 GPATCH2LQ9NWQ4 482 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 DNAJC28Q9NX36 388 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 UBA2Q9UBT2 640 aaPredicted RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
CHD3-206ENST00000452447 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
CHD3-206ENST00000452447 ASXL3Q9C0F0 2248 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 POM121BA6NF01 834 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 TRABD2BA6NFA1 517 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 NEMP2A6NFY4 417 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 TAF4O00268 1085 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 DDX3XO00571 662 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHD3-206ENST00000452447 SIGLEC6O43699 453 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 CAPNS1P04632 268 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 SKILP12757 684 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 XPAP23025 273 aaPredicted RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 RABIFP47224 123 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 NDST2P52849 883 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 HNRNPKP61978 463 aaKnown RBP eCLIP13.06□□□□□ -0.32
CHD3-206ENST00000452447 DAB2P98082 770 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 ZNF211Q13398 564 aaPredicted RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 ILKQ13418 452 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 PPP6R3Q5H9R7 873 aaPredicted RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 KYAT3Q6YP21 454 aaKnown RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 SLC22A18ASQ8N1D0 253 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 MDM1Q8TC05 714 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 FNIP1Q8TF40 1166 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 TSC1Q92574 1164 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 BMFQ96LC9 184 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 LENG8Q96PV6 779 aaPredicted RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 FUCA2Q9BTY2 467 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
CHD3-206ENST00000452447 GGT7Q9UJ14 662 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 ITM2BQ9Y287 266 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 MFHAS1Q9Y4C4 1052 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 ANKRD36A6QL64 1941 aa13.06□□□□□ -0.32
CHD3-206ENST00000452447 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 GOLGA6L19H0YKK7 550 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 H3BM21 787 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 TRIM38O00635 465 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 RAD51BO15315 384 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 FFAR2O15552 330 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 PIAS2O75928 621 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 MYBL1P10243 752 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 ALPPL2P10696 532 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 PTMSP20962 102 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 MIPP30301 263 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 PDE1CQ14123 709 aaPredicted RBP13.05□□□□□ -0.32
CHD3-206ENST00000452447 GRM3Q14832 879 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 CA9Q16790 459 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 KLHL40Q2TBA0 621 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 TDRD12Q587J7 1177 aaKnown RBP13.05□□□□□ -0.32
CHD3-206ENST00000452447 ZNF542PQ5EBM4 170 aa13.05□□□□□ -0.32
CHD3-206ENST00000452447 FIGNQ5HY92 759 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms