RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SHROOM3Q8TF72 1996 aa20.23■□□□□ 0.83
COL9A3-202ENST00000452372 CHD6Q8TD26 2715 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 A0A0U1RQJ8 604 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 LRRC72A6NJI9 287 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 C10orf142B7Z368 130 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 PLK4O00444 970 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 PEX11BO96011 259 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 SERPINF2P08697 491 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 CEACAM1P13688 526 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 GKP32189 559 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 ADPRHP54922 357 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 NSUN2Q08J23 767 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL9A3-202ENST00000452372 GALNT2Q10471 571 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 LBRQ14739 615 aaKnown RBP20.22■□□□□ 0.83
COL9A3-202ENST00000452372 TAZQ16635 292 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 DUOXA1Q1HG43 343 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 UAP1L1Q3KQV9 507 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 PIP5KL1Q5T9C9 394 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 TMCO4Q5TGY1 634 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 AGBL4Q5VU57 503 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 SLC9A4Q6AI14 798 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 MFSD7Q6UXD7 560 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 RGL4Q8IZJ4 473 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 LRRC57Q8N9N7 239 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 TSEN2Q8NCE0 465 aaKnown RBP20.22■□□□□ 0.83
COL9A3-202ENST00000452372 OR14C36Q8NHC7 312 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 PSKH2Q96QS6 385 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 OSBPL1AQ9BXW6 950 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 CPEB1Q9BZB8 566 aaKnown RBP20.22■□□□□ 0.83
COL9A3-202ENST00000452372 KDM4CQ9H3R0 1056 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 TRIM10Q9UDY6 481 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 SLC6A14Q9UN76 642 aa20.22■□□□□ 0.83
COL9A3-202ENST00000452372 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.22■□□□□ 0.83
COL9A3-202ENST00000452372 MACROD2A1Z1Q3 448 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 GRID2IPA4D2P6 1211 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 FAM47DPA6NHR8 397 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 MEI4A8MW99 385 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 PLRG1O43660 514 aaKnown RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 ZRANB2O95218 330 aaKnown RBP eCLIP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 ZFXP17010 805 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 ITGB7P26010 798 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 GARSP41250 739 aaKnown RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 CSNK1DP48730 415 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 GBE1Q04446 702 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 SLC10A7Q0GE19 358 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 NCEH1Q6PIU2 408 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 ERN2Q76MJ5 926 aaKnown RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 PIP4P1Q86T03 277 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 RCOR2Q8IZ40 523 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 PLD5Q8N7P1 536 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 BIRC7Q96CA5 298 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 EXOC2Q96KP1 924 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 CINPQ9BW66 212 aaPredicted RBP20.21■□□□□ 0.83
COL9A3-202ENST00000452372 SEPT3Q9UH03 358 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 PCDHA3Q9Y5H8 950 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 CFAP47Q6ZTR5 3102 aa20.21■□□□□ 0.83
COL9A3-202ENST00000452372 INSIG1O15503 277 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 TOP3BO95985 862 aaKnown RBP20.2■□□□□ 0.82
COL9A3-202ENST00000452372 MX2P20592 715 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 MAOBP27338 520 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 CTNNA1P35221 906 aaKnown RBP20.2■□□□□ 0.82
COL9A3-202ENST00000452372 CDKN2BP42772 138 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 MAPK8P45983 427 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 MARCKSL1P49006 195 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 TAS2R38P59533 333 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 CCZ1BP86790 482 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 CCZ1P86791 482 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-202ENST00000452372 SLC10A2Q12908 348 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-202ENST00000452372 ZNF805Q5CZA5 627 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 KIAA0895LQ68EN5 471 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 GDPD4Q6W3E5 623 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
COL9A3-202ENST00000452372 DEFB124Q8NES8 71 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 EXD1Q8NHP7 514 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 CEP76Q8TAP6 659 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 NSMCE1Q8WV22 266 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 KRT35Q92764 455 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 TSGA13Q96PP4 275 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 DTLQ9NZJ0 730 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 IGF2RP11717 2491 aa20.2■□□□□ 0.82
COL9A3-202ENST00000452372 ASPMQ8IZT6 3477 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3DA0A087WVF3 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3IA0A087WXS9 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3EA0A087X179 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3KA0A087X1G2 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3FA6NER0 549 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3LB9A6J9 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 APOL1O14791 398 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 NRDCO43847 1150 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 FSBPO95073 299 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 MAP3K6O95382 1288 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 CFIP05156 583 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 UGT2B4P06133 528 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 IGHV4-34P06331 123 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3HP0C7X1 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 CCNCP24863 283 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 RGRP47804 291 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 RENBPP51606 427 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 CCR5P51681 352 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms