RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 DHRS13Q6UX07 377 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 ZSCAN30Q86W11 494 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 PROSER1Q86XN7 944 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 ZNF354CQ86Y25 554 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 MARCH9Q86YJ5 346 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 GALNT15Q8N3T1 639 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 RYBPQ8N488 228 aaPredicted RBP12.66□□□□□ -0.38
CPSF4-208ENST00000452047 NETO2Q8NC67 525 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 FAM174AQ8TBP5 190 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 FEM1CQ96JP0 617 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 BMFQ96LC9 184 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 GDAP1L1Q96MZ0 367 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 SNRNP25Q9BV90 132 aaKnown RBP12.66□□□□□ -0.38
CPSF4-208ENST00000452047 SLC17A9Q9BYT1 436 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 PDFQ9HBH1 243 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 KLHL11Q9NVR0 708 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 GGT7Q9UJ14 662 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 ITM2BQ9Y287 266 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 MFHAS1Q9Y4C4 1052 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 APC2O95996 2303 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 LRRK1Q38SD2 2015 aa12.66□□□□□ -0.38
CPSF4-208ENST00000452047 ANKRD36A6QL64 1941 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 POM121BA6NF01 834 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 A6NNZ2 444 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 EIF3CLB5ME19 914 aaKnown RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 TSPAN6O43657 245 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 PAK4O96013 591 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 SERPINC1P01008 464 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 DESP17661 470 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 CAMK2BQ13554 666 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 CCDC157Q569K6 752 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 HGSNATQ68CP4 663 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 GDPD4Q6W3E5 623 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 KYAT3Q6YP21 454 aaKnown RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 SLC25A45Q8N413 288 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 KLHL32Q96NJ5 620 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 LENG8Q96PV6 779 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 EIF3CQ99613 913 aaKnown RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 C1QTNF2Q9BXJ5 285 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 CALN1Q9BXU9 219 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 DHX35Q9H5Z1 703 aaKnown RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 LHX3Q9UBR4 397 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 CNOT8Q9UFF9 292 aaKnown RBP12.65□□□□□ -0.38
CPSF4-208ENST00000452047 HS3ST3A1Q9Y663 406 aa12.65□□□□□ -0.38
CPSF4-208ENST00000452047 ACACAQ13085 2346 aa12.65□□□□□ -0.39
CPSF4-208ENST00000452047 A0A1W2PQJ5 194 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 FAM149AA5PLN7 773 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 IGLON5A6NGN9 336 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 EEF2KO00418 725 aaKnown RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 TRIM38O00635 465 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 LRCH4O75427 683 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 RFPL3O75679 317 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 IGSF6O95976 241 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 C1SP09871 688 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 GIMD1P0DJR0 217 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 SKILP12757 684 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 DGKAP23743 735 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 MIPP30301 263 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 NDST2P52849 883 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 RHOAP61586 193 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 FANCCQ00597 558 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 CYTH1Q15438 398 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 PROX2Q3B8N5 592 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 LRRC73Q5JTD7 316 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 Q6ZSR6 202 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 RFX8Q6ZV50 586 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 PTAR1Q7Z6K3 402 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 PSTKQ8IV42 348 aaKnown RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 DENND6BQ8NEG7 585 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 ASB12Q8WXK4 309 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 ZNF653Q96CK0 615 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 ARHGEF26Q96DR7 871 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 IFT43Q96FT9 208 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 CELF6Q96J87 481 aaKnown RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 EXOC2Q96KP1 924 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 KCTD15Q96SI1 283 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 UCKL1Q9NWZ5 548 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 DONSONQ9NYP3 566 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
CPSF4-208ENST00000452047 PCSK1NQ9UHG2 260 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 SCINQ9Y6U3 715 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 MYLKQ15746 1914 aa12.64□□□□□ -0.39
CPSF4-208ENST00000452047 CACNA1GO43497 2377 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 SPTY2D1-AS1A0A0U1RR47 76 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 J3KR12 359 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 INSIG1O15503 277 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 PRPSAP2O60256 369 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 PRAMEF11O60813 436 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 PIAS2O75928 621 aa12.63□□□□□ -0.39
CPSF4-208ENST00000452047 RNF8O76064 485 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms