RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 ZFR2Q9UPR6 939 aaKnown RBP16.27■□□□□ 0.2
SGCE-208ENST00000450385 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 NEMP2A6NFY4 417 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 A6NNZ2 444 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 C1QTNF9BB2RNN3 333 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 EEF2KO00418 725 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 KRIT1O00522 736 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 DAPK3O43293 454 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TMCC1O94876 653 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TOP3BO95985 862 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 ATXN1LP0C7T5 689 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 C1QTNF9P0C862 333 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 RABIFP47224 123 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 OGDHQ02218 1023 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 KYAT3Q6YP21 454 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 KANSL1Q7Z3B3 1105 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TTC7BQ86TV6 843 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TMPRSS12Q86WS5 348 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 RYBPQ8N488 228 aaPredicted RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 HMCESQ96FZ2 354 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TUBGCP5Q96RT8 1024 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 MAGEB5Q9BZ81 275 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 TM6SF2Q9BZW4 377 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 DHX35Q9H5Z1 703 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 ZWILCHQ9H900 591 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 UBA2Q9UBT2 640 aaPredicted RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 DKK4Q9UBT3 224 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 LCMT1Q9UIC8 334 aa16.26■□□□□ 0.19
SGCE-208ENST00000450385 LUC7L2Q9Y383 392 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.19
SGCE-208ENST00000450385 TDRD6O60522 2096 aaKnown RBP16.26■□□□□ 0.19
SGCE-208ENST00000450385 NEMP1O14524 444 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 ENC1O14682 589 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 AREL1O15033 823 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 SPINK2P20155 84 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 MIPP30301 263 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 RHOAP61586 193 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 YPEL5P62699 121 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 ELP6Q0PNE2 266 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 ZNF211Q13398 564 aaPredicted RBP16.25■□□□□ 0.19
SGCE-208ENST00000450385 AFMIDQ63HM1 303 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 PARS2Q7L3T8 475 aaKnown RBP16.25■□□□□ 0.19
SGCE-208ENST00000450385 NIPA2Q8N8Q9 360 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 TSC1Q92574 1164 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 ZNF653Q96CK0 615 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 CNDP2Q96KP4 475 aaKnown RBP16.25■□□□□ 0.19
SGCE-208ENST00000450385 USP29Q9HBJ7 922 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 GPR27Q9NS67 375 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 EVA1BQ9NVM1 165 aa16.25■□□□□ 0.19
SGCE-208ENST00000450385 CFAP69A5D8W1 941 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 FPGTO14772 594 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 PRAMEF11O60813 436 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 PAK4O96013 591 aaPredicted RBP16.24■□□□□ 0.19
SGCE-208ENST00000450385 UGT2B4P06133 528 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 ALPPL2P10696 532 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 CKMT2P17540 419 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 RENBPP51606 427 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 HNRNPKP61978 463 aaKnown RBP eCLIP16.24■□□□□ 0.191e-10■■■■■ 35.6
SGCE-208ENST00000450385 HGSNATQ68CP4 663 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 BRAT1Q6PJG6 821 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 RFX8Q6ZV50 586 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 LRRC49Q8IUZ0 686 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 ARFGAP1Q8N6T3 406 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 PNPLA1Q8N8W4 532 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 TEKT4Q8WW24 435 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 KLHL32Q96NJ5 620 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 ZNF599Q96NL3 588 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 DUSP23Q9BVJ7 150 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 NCKIPSDQ9NZQ3 722 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 CSNK1G3Q9Y6M4 447 aa16.24■□□□□ 0.19
SGCE-208ENST00000450385 SPTY2D1-AS1A0A0U1RR47 76 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 A0A1W2PQ67 120 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 ZZEF1O43149 2961 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 LRCH4O75427 683 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 PRLRP16471 622 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
SGCE-208ENST00000450385 HNF1BP35680 557 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 ARL4AP40617 200 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 POLR2LP62875 67 aaKnown RBP16.23■□□□□ 0.19
SGCE-208ENST00000450385 E2F1Q01094 437 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 IL9RQ01113 521 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 IL10RBQ08334 325 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 BNIP3Q12983 259 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 PTK2BQ14289 1009 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 DPYSL2Q16555 572 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 TDRD12Q587J7 1177 aaKnown RBP16.23■□□□□ 0.19
SGCE-208ENST00000450385 E4F1Q66K89 784 aaPredicted RBP16.23■□□□□ 0.19
SGCE-208ENST00000450385 SEL1L3Q68CR1 1132 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 Q6ZSR6 202 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 GATAD2AQ86YP4 633 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 BTN2A2Q8WVV5 523 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 BMFQ96LC9 184 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 TBATAQ96M53 351 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
SGCE-208ENST00000450385 SNRNP25Q9BV90 132 aaKnown RBP16.23■□□□□ 0.19
SGCE-208ENST00000450385 SUV39H2Q9H5I1 410 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 PDFQ9HBH1 243 aa16.23■□□□□ 0.19
SGCE-208ENST00000450385 PCSK1NQ9UHG2 260 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms