RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 HTR7P34969 479 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 RPS21P63220 83 aaKnown RBP12.54□□□□□ -0.4
MSH5-209ENST00000450148 KLHL30Q0D2K2 578 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 PARP15Q460N3 678 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 AFMIDQ63HM1 303 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 DHRS13Q6UX07 377 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 PROSER1Q86XN7 944 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 CASKIN2Q8WXE0 1202 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 RAB7BQ96AH8 199 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 FEM1CQ96JP0 617 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 KLHL32Q96NJ5 620 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
MSH5-209ENST00000450148 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 ISCUQ9H1K1 167 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 KLHL11Q9NVR0 708 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
MSH5-209ENST00000450148 ITM2BQ9Y287 266 aa12.54□□□□□ -0.4
MSH5-209ENST00000450148 COL27A1Q8IZC6 1860 aaPredicted RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 LRP4O75096 1905 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 FAM149AA5PLN7 773 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 IGLON5A6NGN9 336 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 J3KR12 359 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 TRIM38O00635 465 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 INSIG1O15503 277 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 TSPAN6O43657 245 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 LRCH4O75427 683 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ITIH2P19823 946 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 DGKAP23743 735 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 MIPP30301 263 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 TPI1P60174 286 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 FANCCQ00597 558 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 PROX2Q3B8N5 592 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 TPRG1LQ5T0D9 272 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ERMARDQ5T6L9 678 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 KYAT3Q6YP21 454 aaKnown RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 Q6ZSR6 202 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ZSCAN30Q86W11 494 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ARHGAP12Q8IWW6 846 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 GALNT15Q8N3T1 639 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 FAM174AQ8TBP5 190 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ASB12Q8WXK4 309 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 GDAP1L1Q96MZ0 367 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 LENG8Q96PV6 779 aaPredicted RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 OSBPL1AQ9BXW6 950 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 CPEB1Q9BZB8 566 aaKnown RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 DHX35Q9H5Z1 703 aaKnown RBP12.53□□□□□ -0.4
MSH5-209ENST00000450148 UCKL1Q9NWZ5 548 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 PCSK1NQ9UHG2 260 aa12.53□□□□□ -0.4
MSH5-209ENST00000450148 ADAMTS20P59510 1910 aa12.52□□□□□ -0.4
MSH5-209ENST00000450148 ASXL3Q9C0F0 2248 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 A0A1W2PQJ5 194 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 A6NNZ2 444 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 EIF3CLB5ME19 914 aaKnown RBP12.52□□□□□ -0.41
MSH5-209ENST00000450148 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 RFPL3O75679 317 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 PIAS2O75928 621 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 IGSF6O95976 241 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 SERPINC1P01008 464 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 C1SP09871 688 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 TCF4P15884 667 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 TIMP2P16035 220 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 ERCC2P18074 760 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 IL1R2P27930 398 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 NDST2P52849 883 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 CLDN6P56747 220 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 RHOAP61586 193 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 MAPK8IP2Q13387 824 aaPredicted RBP12.52□□□□□ -0.41
MSH5-209ENST00000450148 FZD2Q14332 565 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 LRRC73Q5JTD7 316 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 RFX8Q6ZV50 586 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 NPWQ8N729 165 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 MDM1Q8TC05 714 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 CENPTQ96BT3 561 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 ZNF653Q96CK0 615 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 IFT43Q96FT9 208 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 CELF6Q96J87 481 aaKnown RBP12.52□□□□□ -0.41
MSH5-209ENST00000450148 EXOC2Q96KP1 924 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 EIF3CQ99613 913 aaKnown RBP12.52□□□□□ -0.41
MSH5-209ENST00000450148 CALN1Q9BXU9 219 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 DKK3Q9UBP4 350 aa12.52□□□□□ -0.41
MSH5-209ENST00000450148 ACACAQ13085 2346 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 WDFY3Q8IZQ1 3526 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 SPTY2D1-AS1A0A0U1RR47 76 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 EEF2KO00418 725 aaKnown RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 SIGLEC6O43699 453 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
MSH5-209ENST00000450148 RNF8O76064 485 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 CKMT2P17540 419 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 ACP1P24666 158 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 RGRP47804 291 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 HCAR3P49019 387 aa12.51□□□□□ -0.41
MSH5-209ENST00000450148 PAPOLAP51003 745 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms