RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 LRRC63Q05C16 580 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 BTKQ06187 659 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SPAG1Q07617 926 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PPARAQ07869 468 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CD300CQ08708 224 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 FCHO2Q0JRZ9 810 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CETN1Q12798 172 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 GRSF1Q12849 480 aaKnown RBP eCLIP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 AIMP1Q12904 312 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 BAMBIQ13145 260 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 MED21Q13503 144 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 GALNT3Q14435 633 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SEMA3AQ14563 771 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SSPNQ14714 243 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PDK3Q15120 406 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PKN2Q16513 984 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 LETM2Q2VYF4 491 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRMT5Q32P41 509 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 Q3ZCU0 254 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CFAP221Q4G0U5 840 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TTC38Q5R3I4 469 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC9C2Q5TAH2 1124 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 OGFRL1Q5TC84 451 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 FAM205BPQ63HN1 556 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ANKRD40Q6AI12 368 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TIGD7Q6NT04 549 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RFWD3Q6PCD5 774 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 DARS2Q6PI48 645 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SHC4Q6S5L8 630 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ABRAXAS1Q6UWZ7 409 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 VSTM1Q6UX27 236 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 NPNTQ6UXI9 565 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 UNQ6494/PRO21346Q6UXR6 183 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PPP1R21Q6ZMI0 780 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 HTR3DQ70Z44 454 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CBLL1Q75N03 491 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 KANSL1Q7Z3B3 1105 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PRUNE1Q86TP1 453 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 GPR180Q86V85 440 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 HPS6Q86YV9 775 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CILP2Q8IUL8 1156 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TRIM48Q8IWZ4 208 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TP53INP2Q8IXH6 220 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PM20D2Q8IYS1 436 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TBC1D21Q8IYX1 336 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ELMOD2Q8IZ81 293 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT78Q8N1N4 520 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 LIX1Q8N485 282 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ANKRD42Q8N9B4 389 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ATAD1Q8NBU5 361 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RBM15BQ8NDT2 890 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CEP70Q8NHQ1 597 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF420Q8TAQ5 688 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLC22A8Q8TCC7 542 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 FAM172AQ8WUF8 416 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 C10orf82Q8WW14 230 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ASB11Q8WXH4 323 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TANKQ92844 425 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SH3KBP1Q96B97 665 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CAPZA3Q96KX2 299 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 MAGEB18Q96M61 343 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZNF578Q96N58 590 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SERPINB12Q96P63 405 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TWNKQ96RR1 684 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TBCBQ99426 244 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 KRT12Q99456 494 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CHP1Q99653 195 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 NAP1L4Q99733 375 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CCDC77Q9BR77 488 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 BTBD10Q9BSF8 475 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 C17orf80Q9BSJ5 609 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ISCA1Q9BUE6 129 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ROPN1BQ9BZX4 212 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 MTMR12Q9C0I1 747 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 OR2B2Q9GZK3 357 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 STMN4Q9H169 189 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 NEUROG2Q9H2A3 272 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 EBF3Q9H4W6 596 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 SLITRK6Q9H5Y7 841 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RMND5AQ9H871 391 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ROPN1Q9HAT0 212 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAVER2Q9HCJ3 691 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 EPB41L5Q9HCM4 733 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 NGRNQ9NPE2 291 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 FANCFQ9NPI8 374 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 ZDHHC18Q9NUE0 388 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 PARVAQ9NVD7 372 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 DDX18Q9NVP1 670 aaKnown RBP3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 KCND2Q9NZV8 630 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 CEP72Q9P209 647 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 KLHL14Q9P2G3 628 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 TBC1D14Q9P2M4 693 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 DPP7Q9UHL4 492 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 MOSPD1Q9UJG1 213 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 FBXL5Q9UKA1 691 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 POU2F3Q9UKI9 436 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 RAB26Q9ULW5 256 aa3.69□□□□□ -1.82
HMGB3P8-201ENST00000449709 GUCA1BQ9UMX6 200 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms