RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 STK39Q9UEW8 545 aa17.12■□□□□ 0.33
TOM1-210ENST00000449058 VPS28Q9UK41 221 aa17.12■□□□□ 0.33
TOM1-210ENST00000449058 FBXO5Q9UKT4 447 aa17.12■□□□□ 0.33
TOM1-210ENST00000449058 CDYLQ9Y232 598 aa17.12■□□□□ 0.33
TOM1-210ENST00000449058 HS3ST4Q9Y661 456 aa17.12■□□□□ 0.33
TOM1-210ENST00000449058 A0A087X1B8 175 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 CASQ2O14958 399 aaPredicted RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 RPLP2P05387 115 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 JUNP05412 331 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 TYMPP19971 482 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 CHRNA4P43681 627 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 NUDT2P50583 147 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 ZNF470Q6ECI4 717 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 C16orf89Q6UX73 402 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 C14orf80Q86SX3 495 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 KYQ8NBH2 561 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 ELMO2Q96JJ3 720 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 UPF3AQ9H1J1 476 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 VCX3BQ9H321 246 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 ARNT2Q9HBZ2 717 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 TBC1D13Q9NVG8 400 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 OSER1Q9NX31 292 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 FNIP2Q9P278 1114 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 BPTFQ12830 3046 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 AIM2O14862 343 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 MAP3K13O43283 966 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 SNUPNO95149 360 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 RAG1P15918 1043 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 DNAJB13P59910 316 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 POU4F1Q01851 419 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 CYLC2Q14093 348 aaPredicted RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 LPCAT4Q643R3 524 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 KIAA0408Q6ZU52 694 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 SPATA2LQ8IUW3 424 aaPredicted RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 PHC3Q8NDX5 983 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 KLHL4Q9C0H6 718 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 EBF3Q9H4W6 596 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 NOL6Q9H6R4 1146 aaKnown RBP17.11■□□□□ 0.33
TOM1-210ENST00000449058 MPP6Q9NZW5 540 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 PDP2Q9P2J9 529 aa17.11■□□□□ 0.33
TOM1-210ENST00000449058 PEX11BO96011 259 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 UBTFL6P0CB48 400 aaPredicted RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 GRIK1P39086 918 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 MLLT6P55198 1093 aaPredicted RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 SFT2D3Q587I9 215 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 TMEM198Q66K66 360 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 NEPROQ6NW34 567 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 DSELQ8IZU8 1212 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 SPATA6LQ8N4H0 392 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 HIPK4Q8NE63 616 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 GDPD5Q8WTR4 605 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 HEXDCQ8WVB3 486 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 MAELQ96JY0 434 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 OMDQ99983 421 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 ATXN3LQ9H3M9 355 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 ATP13A1Q9HD20 1204 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 CLIC5Q9NZA1 410 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 IPO11Q9UI26 975 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 TTC3P53804 2025 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 DOCK4Q8N1I0 1966 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 PLXNA3P51805 1871 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 F8W810 466 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 TNPO2O14787 897 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 THPOP40225 353 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 WNT3AP56704 352 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 PIWIL4Q7Z3Z4 852 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 C1orf74Q96LT6 269 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 SERPINI1Q99574 410 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 PPP1R12CQ9BZL4 782 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 SLC25A51Q9H1U9 297 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 ZBTB26Q9HCK0 441 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 IGSF5Q9NSI5 407 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 NUDT5Q9UKK9 219 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 INPP5FQ9Y2H2 1132 aa17.1■□□□□ 0.33
TOM1-210ENST00000449058 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
TOM1-210ENST00000449058 ARHGEF37A1IGU5 675 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 AURKAO14965 403 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PEX1O43933 1283 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 MOCS2O96007 188 aaPredicted RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 CYBAP13498 195 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 CPB1P15086 417 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 ATP5F1P24539 256 aaPredicted RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 YY1P25490 414 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 PEX2P28328 305 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 KPNA2P52292 529 aaKnown RBP17.09■□□□□ 0.33
TOM1-210ENST00000449058 SEPT6Q14141 434 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 RNF220Q5VTB9 566 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 CST9Q5W186 159 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 FATE1Q969F0 183 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 SERPINB11Q96P15 392 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 CATSPER2Q96P56 530 aa17.09■□□□□ 0.33
TOM1-210ENST00000449058 ADAM2Q99965 735 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms