RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 PRDM12Q9H4Q4 367 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 KANSL3Q9P2N6 904 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 NFASCO94856 1347 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 A0A1W2PPM1 405 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 TRAFD1O14545 582 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 HAT1O14929 419 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GSC2O15499 205 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ULK1O75385 1050 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 POMCP01189 267 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ALDH2P05091 517 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 NFICP08651 508 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ALOX5P09917 674 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 USP17L7P0C7H9 530 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ZNF286BP0CG31 522 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 RCVRNP35243 200 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 SLC26A3P40879 764 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CRATP43155 626 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GTF2A2P52657 109 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 NOMO3P69849 1222 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 LACTB2Q53H82 288 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 MFSD5Q6N075 450 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ATG14Q6ZNE5 492 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CLNKQ7Z7G1 428 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 FAM83AQ86UY5 434 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 USP7Q93009 1102 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 QKIQ96PU8 341 aaKnown RBP eCLIP7.85□□□□□ -1.159e-8■■■□□ 18.7
NEDD9-204ENST00000448183 ADI1Q9BV57 179 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 WDR12Q9GZL7 423 aaKnown RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 PORCNQ9H237 461 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ARL8BQ9NVJ2 186 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.85□□□□□ -1.155e-7■■■□□ 17.8
NEDD9-204ENST00000448183 XPR1Q9UBH6 696 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 TBC1D30Q9Y2I9 924 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 RTN3O95197 1032 aaPredicted RBP7.85□□□□□ -1.15
NEDD9-204ENST00000448183 LCA5LO95447 670 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 CST1P01037 141 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 RPN2P04844 631 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ITGA2P17301 1181 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 OAZ1P54368 228 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 HUNKP57058 714 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 DDI2Q5TDH0 399 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ARMC8Q8IUR7 673 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 FAM47BQ8NA70 645 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 HAS1Q92839 578 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 VMP1Q96GC9 406 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 OMDQ99983 421 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 KIFC1Q9BW19 673 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 TRIM39Q9HCM9 518 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 COG5Q9UP83 839 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 ADGRB1O14514 1584 aa7.85□□□□□ -1.15
NEDD9-204ENST00000448183 GUCY1B2O75343 617 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SH3BGRLO75368 114 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PIAS1O75925 651 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MMP14P50281 582 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SLC7A2P52569 658 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ITIH5Q86UX2 942 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TMEM86AQ8N2M4 240 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 RTKNQ9BST9 563 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SNX15Q9NRS6 342 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ABCC13Q9NSE7 274 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FBXO5Q9UKT4 447 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ENTPD4Q9Y227 616 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FAM47E-STBD1D6RA91 191 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 KPNA6O60684 536 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 NADKO95544 446 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CALCAP01258 141 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 BPGMP07738 259 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 DPEP1P16444 411 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PBX1P40424 430 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MAPKAPK2P49137 400 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FAM183BPQ6ZVS7 135 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 DENND6AQ8IWF6 608 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FAM20CQ8IXL6 584 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CLYBLQ8N0X4 340 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 POMGNT2Q8NAT1 580 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TRAPPC12Q8WVT3 735 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 DNAJB3Q8WWF6 145 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CDH19Q9H159 772 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 RAPGEFL1Q9UHV5 662 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 LYVE1Q9Y5Y7 322 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 RIMS1Q86UR5 1692 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 UMODL1Q5DID0 1318 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 AZIN1O14977 448 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 LYPLA1O75608 230 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PSMD10O75832 226 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SERPINA1P01009 418 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 S100A9P06702 114 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 CDK9P50750 372 aaKnown RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 SMIM11AP58511 58 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 LGALS3BPQ08380 585 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 BNIP1Q12981 228 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 DPYSQ14117 519 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 PACS1Q6VY07 963 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 GPRIN3Q6ZVF9 776 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 ZBTB46Q86UZ6 589 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 C10orf107Q8IVU9 208 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 FAM163AQ96GL9 167 aaPredicted RBP7.84□□□□□ -1.15
NEDD9-204ENST00000448183 TRMOQ9BU70 441 aa7.84□□□□□ -1.15
NEDD9-204ENST00000448183 MECRQ9BV79 373 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms