RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SLC27A2O14975 620 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SLC16A4O15374 487 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 AQP9O43315 295 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 PLRG1O43660 514 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 ZG16O60844 167 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 HUS1O60921 280 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RNASEH1O60930 286 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 RFPL1O75677 317 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 STC2O76061 302 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RPLP0P05388 317 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 IFNAR1P17181 557 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 C5AR1P21730 350 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RPA1P27694 616 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SSTR2P30874 369 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CHKAP35790 457 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RECQLP46063 649 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 ART1P52961 327 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 MC1RQ01726 317 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 AKAP17AQ02040 695 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 GOLGA8FQ08AF8 430 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RAD51AP2Q09MP3 1159 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 GOLGA8DPQ0D2H9 430 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 IFRD2Q12894 506 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 STRN3Q13033 797 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 FZD2Q14332 565 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 C16orf72Q14CZ0 275 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 MLANAQ16655 118 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SOWAHAQ2M3V2 549 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 HNRNPA1L2Q32P51 320 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 POM121L1PQ3SYA9 428 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 C14orf28Q4W4Y0 310 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SETMARQ53H47 684 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 C9orf64Q5T6V5 341 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 PAPD7Q5XG87 772 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 ABI3BPQ7Z7G0 1075 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CILP2Q8IUL8 1156 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 MMAAQ8IVH4 418 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 FAM217AQ8IXS0 508 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 BHLHE22Q8NFJ8 381 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 SCAMP5Q8TAC9 235 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 MYCBPAPQ8TBZ2 947 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 WFIKKN2Q8TEU8 576 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 STARD8Q92502 1023 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 GTF3C6Q969F1 213 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 C19orf60Q96EN9 201 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 NOX5Q96PH1 765 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SLC38A3Q99624 504 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SLC26A6Q9BXS9 759 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CALN1Q9BXU9 219 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SPRY4Q9C004 299 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 C17orf75Q9HAS0 396 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 DNAJC28Q9NX36 388 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RRN3Q9NYV6 651 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 LOC101059948A0A1B0GTJ6 334 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 ANKUB1A6NFN9 424 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SLC7A4O43246 635 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RAD1O60671 282 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 HIP1RO75146 1068 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CST3P01034 146 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 CCL4P13236 92 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CHMLP26374 656 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 HOXD9P28356 352 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 GNA15P30679 374 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 COPB1P53618 953 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 PMS2P54278 862 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 PER3P56645 1201 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RPS26P62854 115 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 KCNA1Q09470 495 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 NECTIN1Q15223 517 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 EARS2Q5JPH6 523 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 MIIPQ5JXC2 388 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 PRAMEF13Q5VWM6 474 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 JMJD6Q6NYC1 403 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 KLHDC10Q6PID8 442 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SPOCD1Q6ZMY3 1216 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 GCNT7Q6ZNI0 430 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CHST9Q7L1S5 443 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 APLFQ8IW19 511 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 SDR16C5Q8N3Y7 309 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CPXM2Q8N436 756 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 RUFY2Q8WXA3 655 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 TAAR9Q96RI9 348 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 HAPLN3Q96S86 360 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 IL12RB2Q99665 862 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 BARD1Q99728 777 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 EFHD1Q9BUP0 239 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 SRRTQ9BXP5 876 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 NACA2Q9H009 215 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 INTS2Q9H0H0 1204 aaKnown RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 CXXC4Q9H2H0 198 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 BHMT2Q9H2M3 363 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 LRRN3Q9H3W5 708 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 GPN2Q9H9Y4 310 aaPredicted RBP3.37□□□□□ -1.87
PMS1-215ENST00000447232 PILRAQ9UKJ1 303 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 NAALADL1Q9UQQ1 740 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 ZNF510Q9Y2H8 683 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 NME7Q9Y5B8 376 aa3.37□□□□□ -1.87
PMS1-215ENST00000447232 CUBNO60494 3623 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 SPTY2D1-AS1A0A0U1RR47 76 aa3.36□□□□□ -1.87
PMS1-215ENST00000447232 TARSL2A2RTX5 802 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms